5XEQ
Crystal Structure of human MDGA1 and human neuroligin-2 complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Neuroligin-2 | polymer | 576 | 64101.1 | 1 | UniProt (Q8NFZ4) Pfam (PF00135) In PDB | Homo sapiens (Human) | |
2 | B | MAM domain-containing glycosylphosphatidylinositol anchor protein 1 | polymer | 319 | 35038.7 | 1 | UniProt (Q8NFP4) Pfam (PF13927) In PDB | Homo sapiens (Human) | GPI and MAM protein,GPIM,Glycosylphosphatidylinositol-MAM,MAM domain-containing protein 3 |
3 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
4 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence modifications
A: 42 - 611 (UniProt: Q8NFZ4)
B: 19 - 330 (UniProt: Q8NFP4)
PDB | External Database | Details |
---|---|---|
Ala 39 | - | expression tag |
Asp 40 | - | expression tag |
Pro 41 | - | expression tag |
Gln 98 | Asn 98 | engineered mutation |
Val 612 | - | expression tag |
Pro 613 | - | expression tag |
Arg 614 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ala 16 | - | expression tag |
Asp 17 | - | expression tag |
Pro 18 | - | expression tag |
Leu 331 | - | expression tag |
Val 332 | - | expression tag |
Pro 333 | - | expression tag |
Arg 334 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 99139.8 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 663.6 | |
All* | Total formula weight | 100227.8 |