5X7N
Crystal structure of meso-diaminopimelate decarboxylase (DAPDC) from Corynebacterium glutamicum
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Diaminopimelate decarboxylase | polymer | 453 | 48528.1 | 2 | UniProt (P09890) Pfam (PF00278) Pfam (PF02784) | Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) | DAPDC |
| 2 | C, D, E, H, I... (A, B) | GLYCEROL | non-polymer | 92.1 | 8 | Chemie (GOL) | |||
| 3 | F, M (A, B) | PYRIDOXAL-5'-PHOSPHATE | non-polymer | 247.1 | 2 | Chemie (PLP) | |||
| 4 | G, N (A, B) | LYSINE | non-polymer | 147.2 | 2 | Chemie (LYS) | |||
| 5 | O, P (A, B) | water | water | 18.0 | 892 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 445 (UniProt: P09890)
| PDB | External Database | Details |
|---|---|---|
| Leu 446 | - | expression tag |
| Glu 447 | - | expression tag |
| His 448 | - | expression tag |
| His 449 | - | expression tag |
| His 450 | - | expression tag |
| His 451 | - | expression tag |
| His 452 | - | expression tag |
| His 453 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 97056.2 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 1525.4 | |
| All* | Total formula weight | 98581.6 |
