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5X6Y

Crystal structure of Rice Dwarf Virus P5 in complex with S-adenosylmethionine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
mRNA capping enzyme P5polymer80490802.54UniProt (by SIFTS) (P14583)Rice dwarf virus (isolate O) (RDV)
2E, F, K, P, Q
(A, B, C)
S-ADENOSYLMETHIONINEnon-polymer398.45Chemie (SAM)
3G, H, I, L, M...
(A, B, C, D)
1,2-ETHANEDIOLnon-polymer62.19Chemie (EDO)
4J, O, U
(A, B, D)
CITRATE ANIONnon-polymer189.13Chemie (FLC)
5V, W, X, Y
(A, B, C, D)
waterwater18.0522Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight363209.8
Non-Polymers*Number of molecules17
Total formula weight3118.1
All*Total formula weight366327.9
*Water molecules are not included.

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PDB entries from 2026-01-21

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