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5WNX

DNA polymerase beta substrate complex with incoming 6-TdGTP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164829.11synthetic construct
2B
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3')polymer103061.01synthetic construct
3C
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
4D
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (Human)
5E, F
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
6G
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
7H
(A)
2-amino-9-{2-deoxy-5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-1,9-dihydro-6H-purine-6-thionenon-polymer523.21Chemie (SGT)
8I, J
(A)
CALCIUM IONnon-polymer40.12Chemie (CA)
9K, L
(P, A)
waterwater18.07Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47667.8
Non-Polymers*Number of molecules6
Total formula weight684.8
All*Total formula weight48352.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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