5W9S
Zinc finger of human CXXC5 in complex with CpG DNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | CpG DNA fragment | polymer | 12 | 3663.4 | 2 | synthetic construct | ||
2 | C | CXXC-type zinc finger protein 5 | polymer | 71 | 8335.8 | 1 | UniProt (Q7LFL8) Pfam (PF02008) In PDB | Homo sapiens (Human) | CF5,Putative MAPK-activating protein PM08,Putative NF-kappa-B-activating protein 102,Retinoid-inducible nuclear factor,RINF |
3 | C | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
4 | C | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
5 | C | UNKNOWN ATOM OR ION | non-polymer | 1 | Chemie (UNX) | ||||
6 | water | water | 18.0 | 12 | Chemie (HOH) |
Sequence modifications
C: 254 - 306 (UniProt: Q7LFL8)
PDB | External Database | Details |
---|---|---|
Met 236 | - | initiating methionine |
His 237 | - | expression tag |
His 238 | - | expression tag |
His 239 | - | expression tag |
His 240 | - | expression tag |
His 241 | - | expression tag |
His 242 | - | expression tag |
Ser 243 | - | expression tag |
Ser 244 | - | expression tag |
Gly 245 | - | expression tag |
Arg 246 | - | expression tag |
Glu 247 | - | expression tag |
Asn 248 | - | expression tag |
Leu 249 | - | expression tag |
Tyr 250 | - | expression tag |
Phe 251 | - | expression tag |
Gln 252 | - | expression tag |
Gly 253 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 15662.6 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 226.9 | |
All* | Total formula weight | 15889.5 |