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5W1O

Crystal Structure of HPV16 L1 Pentamer Bound to Heparin Oligosaccharides

Replaces:  3OAE
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, EMajor capsid protein L1polymer42747549.55UniProt (Q81007)
Pfam (PF00500)
In PDB
Human papillomavirusLate major capsid protein L1
2F, H, I, J, K...2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranosebranched500.410In PDB
GlyTouCan (G75183WV)
3G2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-alpha-D-glucopyranosebranched1465.21In PDB
GlyTouCan (G29325GF)
4waterwater18.0147Chemie (HOH)
Sequence modifications
A, B, C, D, E: 21 - 403 (UniProt: Q81007)
PDBExternal DatabaseDetails
Ala 20-expression tag
A, B, C, D, E: 438 - 474 (UniProt: Q81007)
PDBExternal DatabaseDetails
Gly 432-linker
Gly 433-linker
Gly 434-linker
Ser 435-linker
Gly 436-linker
Ala 437-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight237747.7
BranchedNumber of molecules11
Total formula weight6469.3
All*Total formula weight244217.0
*Water molecules are not included.

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PDB entries from 2024-05-01

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