Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5W1O

Crystal Structure of HPV16 L1 Pentamer Bound to Heparin Oligosaccharides

Replaces:  3OAE
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
Collection date2007-10-04
DetectorADSC QUANTUM 315r
Wavelength(s)0.98
Spacegroup nameP 1 21 1
Unit cell lengths96.620, 101.252, 128.182
Unit cell angles90.00, 90.63, 90.00
Refinement procedure
Resolution47.430 - 2.800
R-factor0.226
Rwork0.224
R-free0.27000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2r5h
RMSD bond length0.016
RMSD bond angle1.469
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.4262.900
High resolution limit [Å]2.7972.800
Rmerge0.0820.353
Number of reflections60092
<I/σ(I)>14.28
Completeness [%]98.5
Redundancy2.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529130% PEG400, 0.1 M MES

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon