5VYZ
Crystal structure of Lactococcus lactis pyruvate carboxylase in complex with cyclic-di-AMP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Pyruvate carboxylase | polymer | 1145 | 127476.8 | 4 | UniProt (A0A089XIW4) | Lactococcus lactis | |
| 2 | E, I, L, P (A, B, C, D) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 3 | F, J, M, Q (A, B, C, D) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 4 | Chemie (ADP) | |||
| 4 | G, K, N, R (A, B, C, D) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 5 | H, O (A, D) | (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide | non-polymer | 658.4 | 2 | Chemie (2BA) | |||
| 6 | S, T, U, V (A, B, C, D) | water | water | 18.0 | 919 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 1137 (UniProt: A0A089XIW4)
| PDB | External Database | Details |
|---|---|---|
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Ala 1055 | Thr 1055 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 509907.1 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 3342.6 | |
| All* | Total formula weight | 513249.7 |
