5VYF
Structure of single chain Fel d 1 bound to a neutralizing antibody
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | L, A | Antibody light chain | polymer | 214 | 23400.0 | 2 | Mus musculus | ||
2 | H, B | Antibody Fab heavy chain | polymer | 220 | 23473.2 | 2 | Mus musculus | ||
3 | F, C | Chimera of Major allergen I polypeptide chain 2,Major allergen I polypeptide chain 1 | polymer | 199 | 21919.9 | 2 | UniProt (P30440) UniProt (P30438) Pfam (PF09252) Pfam (PF01099) In PDB | Felis catus (Cat) | AG4,Allergen Cat-1,Allergen Fel d I-B,Allergen FdI,AG4,Allergen Cat-1,Allergen Fel d I-A,Allergen Fel dI |
4 | F, C | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
5 | water | water | 18.0 | 101 | Chemie (HOH) |
Sequence modifications
F, C: 1 - 92 (UniProt: P30440)
F, C: 93 - 162 (UniProt: P30438)
PDB | External Database | Details |
---|---|---|
Ala 33 | Asn 50 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Leu 152 | Val 82 | variant |
Gly 163 | - | expression tag |
Pro 164 | - | expression tag |
Gly 165 | - | expression tag |
Gly 166 | - | expression tag |
Glu 167 | - | expression tag |
Gln 168 | - | expression tag |
Lys 169 | - | expression tag |
Leu 170 | - | expression tag |
Ile 171 | - | expression tag |
Ser 172 | - | expression tag |
Glu 173 | - | expression tag |
Glu 174 | - | expression tag |
Asp 175 | - | expression tag |
Leu 176 | - | expression tag |
Gly 177 | - | expression tag |
Gly 178 | - | expression tag |
Glu 179 | - | expression tag |
Gln 180 | - | expression tag |
Lys 181 | - | expression tag |
Leu 182 | - | expression tag |
Ile 183 | - | expression tag |
Ser 184 | - | expression tag |
Glu 185 | - | expression tag |
Glu 186 | - | expression tag |
Asp 187 | - | expression tag |
Leu 188 | - | expression tag |
Ser 189 | - | expression tag |
Gly 190 | - | expression tag |
His 191 | - | expression tag |
His 192 | - | expression tag |
His 193 | - | expression tag |
His 194 | - | expression tag |
His 195 | - | expression tag |
His 196 | - | expression tag |
Ser 197 | - | expression tag |
Ser 198 | - | expression tag |
Gly 199 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 137586.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 80.2 | |
All* | Total formula weight | 137666.3 |