5VTA
Co-Crystal Structure of DPPIV with a Chemibody Inhibitor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Dipeptidyl peptidase 4 | polymer | 739 | 85529.8 | 4 | UniProt (P14740) Pfam (PF18811) Pfam (PF00930) Pfam (PF00326) | Rattus norvegicus (Rat) | Bile canaliculus domain-specific membrane glycoprotein,Dipeptidyl peptidase IV,DPP IV,GP110 glycoprotein,T-cell activation antigen CD26 |
| 2 | E, F, I, K (L, E, G, J) | Fab light chain | polymer | 213 | 23031.6 | 4 | Mus musculus (Mouse) | ||
| 3 | G, H, J, L (H, F, I, K) | Fab heavy chain | polymer | 217 | 23267.0 | 4 | Mus musculus (Mouse) | ||
| 4 | AA, BA, CA, FA, GA... (B, C, A, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 21 | Chemie (NAG) | |||
| 5 | R (A) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 6 | S, T, XA (A, D) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
| 7 | DA, LA, MA, NA, OA... (B, C, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 10 | Chemie (EDO) | |||
| 8 | EA, QA, Y, YA (B, C, A, D) | 2-{4-[(3R)-3-amino-4-(2,4,5-trifluorophenyl)butanoyl]piperazin-1-yl}-N-(22-oxo-3,6,9,12,15,18-hexaoxa-21-azatricosan-1-yl)acetamide | non-polymer | 707.8 | 4 | Chemie (9K4) | |||
| 9 | AB, BB, CB, DB, EB... (B, C, D, L, E...) | water | water | 18.0 | 118 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 37 - 767 (UniProt: P14740)
| PDB | External Database | Details |
|---|---|---|
| His 768 | - | expression tag |
| His 769 | - | expression tag |
| His 770 | - | expression tag |
| His 771 | - | expression tag |
| His 772 | - | expression tag |
| His 773 | - | expression tag |
| His 774 | - | expression tag |
| His 775 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 527313.7 | |
| Non-Polymers* | Number of molecules | 39 |
| Total formula weight | 8609.8 | |
| All* | Total formula weight | 535923.5 |






