5VS3
Human DNA polymerase beta 8-oxoG:dA extension with dTTP after 90 s
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | T | DNA (5'-D(*CP*CP*GP*AP*CP*AP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*G)-3') | polymer | 16 | 4909.2 | 1 | synthetic construct | ||
2 | P | DNA (5'-D(*CP*TP*GP*AP*TP*GP*CP*GP*CP*AP*T)-3') | polymer | 11 | 3349.2 | 1 | synthetic construct | ||
3 | D | DNA (5'-D(P*GP*TP*CP*GP*G)-3') | polymer | 5 | 1536.0 | 1 | synthetic construct | ||
4 | A | DNA polymerase beta | polymer | 341 | 39070.5 | 1 | UniProt (P06746) Pfam (PF14716) Pfam (PF10391) Pfam (PF14792) Pfam (PF14791) In PDB | Homo sapiens (Human) | |
5 | T, P, D | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
6 | P | THYMIDINE-5'-TRIPHOSPHATE | non-polymer | 482.2 | 1 | Chemie (TTP) | |||
7 | P | PYROPHOSPHATE | non-polymer | 178.0 | 1 | Chemie (PPV) | |||
8 | A | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
9 | A | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
10 | water | water | 18.0 | 337 | Chemie (HOH) |
Sequence modifications
A: 1 - 335 (UniProt: P06746)
PDB | External Database | Details |
---|---|---|
His 336 | - | expression tag |
His 337 | - | expression tag |
His 338 | - | expression tag |
His 339 | - | expression tag |
His 340 | - | expression tag |
His 341 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 48865.0 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 1006.1 | |
All* | Total formula weight | 49871.1 |