5VL1
Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Lysine--tRNA ligase | polymer | 506 | 56581.6 | 4 | UniProt (A0PV47) Pfam (PF01336) Pfam (PF00152) | Mycobacterium ulcerans (strain Agy99) | Lysyl-tRNA synthetase,LysRS |
| 2 | E, I, L, N (A, B, C, D) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 4 | Chemie (PGE) | |||
| 3 | F, J, M, O (A, B, C, D) | LYSINE | non-polymer | 147.2 | 4 | Chemie (LYS) | |||
| 4 | G, H, K (A, B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
| 5 | P, Q, R, S (A, B, C, D) | water | water | 18.0 | 325 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 498 (UniProt: A0PV47)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | initiating methionine |
| Ala -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 226326.5 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1507.8 | |
| All* | Total formula weight | 227834.3 |
