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5VJA

Crystal Structure of human zipper-interacting protein kinase (ZIPK, alias DAPK3) in complex with a pyrazolo[3,4-d]pyrimidinone ligand (HS38)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Death-associated protein kinase 3polymer28332545.14UniProt (O43293)
Pfam (PF00069)
Homo sapiens (Human)DAP kinase 3,DAP-like kinase,Dlk,MYPT1 kinase,Zipper-interacting protein kinase,ZIP-kinase
2E, G, I, L
(A, B, C, D)
DIMETHYL SULFOXIDEnon-polymer78.14Chemie (DMS)
3F, H, J, M
(A, B, C, D)
(2R)-2-{[1-(3-chlorophenyl)-4-oxo-4,5-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl]sulfanyl}propanamidenon-polymer349.84Chemie (DUK)
4K
(D)
ISOLEUCINEnon-polymer131.21Chemie (ILE)
5N, O, P, Q
(A, B, C, D)
waterwater18.0476Chemie (HOH)
Sequence modifications
A, B, C, D: 9 - 289 (UniProt: O43293)
PDBExternal DatabaseDetails
Ser 7-expression tag
Met 8-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight130180.5
Non-Polymers*Number of molecules9
Total formula weight1842.9
All*Total formula weight132023.4
*Water molecules are not included.

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PDB entries from 2025-12-24

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