5VIG
Crystal structure of anti-Zika antibody Z006 bound to Zika virus envelope protein DIII
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D (H, A) | Fab heavy chain | polymer | 232 | 25110.2 | 2 | UniProt (S6B291) Pfam (PF07686) Pfam (PF07654) | Homo sapiens (human) | |
2 | B, E (L, B) | Fab light chain | polymer | 213 | 23411.1 | 2 | UniProt (P0DOX7) Pfam (PF07686) Pfam (PF07654) | Homo sapiens (human) | Immunoglobulin kappa light chain EU |
3 | C, F (Z, G) | Zika virus envelope protein DIII | polymer | 110 | 11935.7 | 2 | UniProt (A0A1I9ZK43) Pfam (PF02832) UniProt (by SIFTS) (A0A192GPS0) | Zika virus (ZIKV) | |
4 | G (A) | CITRATE ANION | non-polymer | 189.1 | 1 | Chemie (FLC) |
Sequence modifications
H, A: 1 - 105 (PDB: 5VIG)
H, A: 106 - 219 (UniProt: S6B291)
L, B: 1 - 108 (PDB: 5VIG)
L, B: 109 - 214 (UniProt: P0DOX7)
Z, G: 299 - 407 (UniProt: A0A1I9ZK43)
H, A: 106 - 219 (UniProt: S6B291)
PDB | External Database | Details |
---|---|---|
His 220 | - | expression tag |
His 221 | - | expression tag |
His 222 | - | expression tag |
His 223 | - | expression tag |
His 224 | - | expression tag |
His 225 | - | expression tag |
L, B: 109 - 214 (UniProt: P0DOX7)
Z, G: 299 - 407 (UniProt: A0A1I9ZK43)
PDB | External Database | Details |
---|---|---|
Met 298 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 120914.0 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 189.1 | |
All* | Total formula weight | 121103.1 |