5VCP

Crystal structure of a peptide deformylase from Burkholderia xenovorans in complex with actinonin

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D (A, B, C, D)	Peptide deformylase	polymer	185	20942.8	4	UniProt (Q13XB1) Pfam (PF01327)	Paraburkholderia xenovorans (strain LB400)	PDF, Polypeptide deformylase, BuxeA.00078.a
2	E, H, L, N (A, B, C, D)	FE (II) ION	non-polymer		55.8	4	Chemie (FE2)
3	F, I, M, O (A, B, C, D)	ACTINONIN	non-polymer		385.5	4	Chemie (BB2)
4	G, J, K (A, B)	MAGNESIUM ION	non-polymer		24.3	3	Chemie (MG)
5	P, Q, R, S (A, B, C, D)	water	water		18.0	343	Chemie (HOH)

Sequence modifications

A, B, C, D: 1 - 177 (UniProt: Q13XB1)

PDB	External Database	Details
Met -7	-	expression tag
Ala -6	-	expression tag
His -5	-	expression tag
His -4	-	expression tag
His -3	-	expression tag
His -2	-	expression tag
His -1	-	expression tag
His 0	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	4
	Total formula weight	83771.2
Non-Polymers*	Number of molecules	11
	Total formula weight	1838.3
All*	Total formula weight	85609.5

*Water molecules are not included.