5VCP
Crystal structure of a peptide deformylase from Burkholderia xenovorans in complex with actinonin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Peptide deformylase | polymer | 185 | 20942.8 | 4 | UniProt (Q13XB1) Pfam (PF01327) In PDB | Paraburkholderia xenovorans (strain LB400) | PDF, Polypeptide deformylase, BuxeA.00078.a |
2 | A, B, C, D | FE (II) ION | non-polymer | 55.8 | 4 | Chemie (FE2) | |||
3 | A, B, C, D | ACTINONIN | non-polymer | 385.5 | 4 | Chemie (BB2) | |||
4 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
5 | water | water | 18.0 | 343 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 177 (UniProt: Q13XB1)
PDB | External Database | Details |
---|---|---|
Met -7 | - | expression tag |
Ala -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 83771.2 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1838.3 | |
All* | Total formula weight | 85609.5 |