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5VCP

Crystal structure of a peptide deformylase from Burkholderia xenovorans in complex with actinonin

Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0042586molecular_functionpeptide deformylase activity
A0046872molecular_functionmetal ion binding
B0006412biological_processtranslation
B0016787molecular_functionhydrolase activity
B0042586molecular_functionpeptide deformylase activity
B0046872molecular_functionmetal ion binding
C0006412biological_processtranslation
C0016787molecular_functionhydrolase activity
C0042586molecular_functionpeptide deformylase activity
C0046872molecular_functionmetal ion binding
D0006412biological_processtranslation
D0016787molecular_functionhydrolase activity
D0042586molecular_functionpeptide deformylase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue FE2 A 201
ChainResidue
AGLN51
ACYS99
AHIS141
AHIS145
ABB2202

site_idAC2
Number of Residues13
Detailsbinding site for residue BB2 A 202
ChainResidue
ATRP96
AGLY98
ACYS99
ALEU100
AARG106
AHIS141
AGLU142
AHIS145
AFE2201
AGLY44
AALA45
AGLY46
AGLN51

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 203
ChainResidue
AASP21
AHOH340
AHOH386
DASN156
DHOH309
DHOH351

site_idAC4
Number of Residues5
Detailsbinding site for residue FE2 B 201
ChainResidue
BGLN51
BCYS99
BHIS141
BHIS145
BBB2202

site_idAC5
Number of Residues13
Detailsbinding site for residue BB2 B 202
ChainResidue
BALA45
BGLY46
BGLN51
BTRP96
BGLY98
BCYS99
BLEU100
BARG106
BPHE134
BHIS141
BGLU142
BHIS145
BFE2201

site_idAC6
Number of Residues6
Detailsbinding site for residue MG B 203
ChainResidue
BASP21
BHOH343
CASN156
CHOH338
CHOH362
CHOH366

site_idAC7
Number of Residues7
Detailsbinding site for residue MG B 204
ChainResidue
AGLU30
AHOH309
AHOH358
AHOH398
BMET92
BHOH312
BHOH384

site_idAC8
Number of Residues5
Detailsbinding site for residue FE2 C 201
ChainResidue
CGLN51
CCYS99
CHIS141
CHIS145
CBB2202

site_idAC9
Number of Residues13
Detailsbinding site for residue BB2 C 202
ChainResidue
CGLY44
CALA45
CGLY46
CGLN51
CTRP96
CGLY98
CCYS99
CLEU100
CARG106
CHIS141
CGLU142
CHIS145
CFE2201

site_idAD1
Number of Residues5
Detailsbinding site for residue FE2 D 201
ChainResidue
DGLN51
DCYS99
DHIS141
DHIS145
DBB2202

site_idAD2
Number of Residues13
Detailsbinding site for residue BB2 D 202
ChainResidue
DALA45
DGLY46
DGLN51
DTRP96
DGLY98
DCYS99
DLEU100
DARG106
DPHE134
DHIS141
DGLU142
DHIS145
DFE2201

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PDB entries from 2024-04-24

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