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5VCM

Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase with bound UDP and Manganese

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferasepolymer41948348.12UniProt (Q10469)
Pfam (PF05060)
Homo sapiens (Human)Beta-1,2-N-acetylglucosaminyltransferase II, GlcNAc-T II, GNT-II, Mannoside acetylglucosaminyltransferase 2, N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase II
2C, I
(A, B)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
3D
(A)
URIDINE-5'-DIPHOSPHATEnon-polymer404.21Chemie (UDP)
4E, F, H, K, L...
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.18Chemie (DMS)
5G
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
6J
(B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
7P, Q
(A, B)
waterwater18.0544Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight96696.2
Non-Polymers*Number of molecules13
Total formula weight1422.4
All*Total formula weight98118.6
*Water molecules are not included.

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PDB entries from 2025-07-23

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