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5VAH

Crystal structure of ATXR5 SET domain in complex with histone H3 di-methylated on R26

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Probable Histone-lysine N-methyltransferase ATXR5polymer22926218.72UniProt (B9RU15)
Pfam (PF00856)
Ricinus communis (Castor bean)
2C, D
(C, D)
Histone H3.2polymer151415.62UniProt (P59226)Arabidopsis thalianaHistone H3.1
3E, F
(A, B)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.42Chemie (SAH)
4G, H, I, J
(A, B, C, D)
waterwater18.0170Chemie (HOH)
Sequence modifications
A, B: 146 - 374 (UniProt: B9RU15)
PDBExternal DatabaseDetails
Ser 298Lys 298conflict
Ala 324Gly 324conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight55268.7
Non-Polymers*Number of molecules2
Total formula weight768.8
All*Total formula weight56037.5
*Water molecules are not included.

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PDB entries from 2025-12-24

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