5V88

Structure of DCN1 bound to NAcM-COV

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	Lysozyme,DCN1-like protein 1	polymer	384	44177.2	1	UniProt (D9IEF7) UniProt (Q96GG9) Pfam (PF00959) Pfam (PF03556) UniProt (by SIFTS) (P00720)	Enterobacteria phage T4	DCUN1 domain-containing protein 1,Defective in cullin neddylation protein 1-like protein 1,Squamous cell carcinoma-related oncogene
2	B (A)	N-{2-[({1-[(2R)-pentan-2-yl]piperidin-4-yl}{[3-(trifluoromethyl)phenyl]carbamoyl}amino)methyl]phenyl}propanamide	non-polymer		518.6	1	Chemie (8ZD)
3	C (A)	water	water		18.0	472	Chemie (HOH)

Sequence modifications

A: 1 - 164 (UniProt: D9IEF7)

PDB	External Database	Details
Met -21	-	initiating methionine
Gly -20	-	expression tag
Ser -19	-	expression tag
Ser -18	-	expression tag
His -17	-	expression tag
His -16	-	expression tag
His -15	-	expression tag
His -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
Ser -11	-	expression tag
Gln -10	-	expression tag
Asp -9	-	expression tag
Leu -8	-	expression tag
Glu -7	-	expression tag
Asn -6	-	expression tag
Leu -5	-	expression tag
Tyr -4	-	expression tag
Phe -3	-	expression tag
Gln -2	-	expression tag
Gly -1	-	expression tag
Ser 0	-	expression tag
Thr 54	Cys 54	conflict
Ala 97	Cys 97	conflict
Ala 127	Asp 127	engineered mutation
Thr 146	Ala 146	conflict
Ala 154	Arg 154	engineered mutation

A: 1062 - 1259 (UniProt: Q96GG9)

Contents of the asymmetric unit

Polymers	Number of chains	1
	Total formula weight	44177.2
Non-Polymers*	Number of molecules	1
	Total formula weight	518.6
All*	Total formula weight	44695.8

*Water molecules are not included.