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5V1O

DNA polymerase beta product complex with 8-oxoG:A and inserted dCTP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164853.21synthetic construct
2B
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(8OG)P*C)-3')polymer113406.21synthetic construct
3C
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
4D
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (Human)
5E, F
(P, A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6G, H, L
(A)
SODIUM IONnon-polymer23.03Chemie (NA)
7I, J, K
(A)
CHLORIDE IONnon-polymer35.53Chemie (CL)
8M
(A)
PYROPHOSPHATEnon-polymer178.01Chemie (PPV)
9N, O, P, Q
(T, P, D, A)
waterwater18.0333Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight48037.1
Non-Polymers*Number of molecules9
Total formula weight401.9
All*Total formula weight48439.0
*Water molecules are not included.

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PDB entries from 2024-11-06

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