5V12
Crystal structure of Carbon Sulfoxide lyase, Egt2 Y134F with sulfenic acid intermediate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | E, G, F, H, D... | Hercynylcysteine sulfoxide lyase | polymer | 501 | 56426.3 | 7 | UniProt (A7UX13) Pfam (PF00266) In PDB | Neurospora crassa OR74A | Ergothioneine biosynthesis protein 2,PLP-binding cysteine desulfurase,PLP-dependent C-S lyase |
2 | C | Hercynylcysteine sulfoxide lyase | polymer | 501 | 56513.3 | 1 | UniProt (A7UX13) Pfam (PF00266) In PDB | Neurospora crassa OR74A | Ergothioneine biosynthesis protein 2,PLP-binding cysteine desulfurase,PLP-dependent C-S lyase |
3 | E, G, F, H, C... | FORMIC ACID | non-polymer | 46.0 | 8 | Chemie (FMT) | |||
4 | F, A | (1S)-1-carboxy-2-[2-(hydroxysulfanyl)-1H-imidazol-4-yl]-N,N,N-trimethylethan-1-aminium | non-polymer | 246.3 | 2 | Chemie (8QJ) | |||
5 | water | water | 18.0 | 412 | Chemie (HOH) |
Sequence modifications
E, G, F, H, D, A, B: 2 - 473 (UniProt: A7UX13)
C: 2 - 473 (UniProt: A7UX13)
PDB | External Database | Details |
---|---|---|
Met -6 | - | initiating methionine |
Gly -5 | - | expression tag |
Asp -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Pro -1 | - | expression tag |
Glu 0 | - | expression tag |
Phe 1 | - | expression tag |
Phe 134 | Tyr 134 | conflict |
Leu 474 | - | expression tag |
Glu 475 | - | expression tag |
Val 476 | - | expression tag |
Asp 477 | - | expression tag |
Leu 478 | - | expression tag |
Gln 479 | - | expression tag |
Gly 480 | - | expression tag |
Asp 481 | - | expression tag |
His 482 | - | expression tag |
Gly 483 | - | expression tag |
Leu 484 | - | expression tag |
Ser 485 | - | expression tag |
Ala 486 | - | expression tag |
Trp 487 | - | expression tag |
Ser 488 | - | expression tag |
His 489 | - | expression tag |
Pro 490 | - | expression tag |
Gln 491 | - | expression tag |
Phe 492 | - | expression tag |
Glu 493 | - | expression tag |
Lys 494 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -6 | - | initiating methionine |
Gly -5 | - | expression tag |
Asp -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Pro -1 | - | expression tag |
Glu 0 | - | expression tag |
Phe 1 | - | expression tag |
Phe 134 | Tyr 134 | conflict |
Leu 474 | - | expression tag |
Glu 475 | - | expression tag |
Val 476 | - | expression tag |
Asp 477 | - | expression tag |
Leu 478 | - | expression tag |
Gln 479 | - | expression tag |
Gly 480 | - | expression tag |
Asp 481 | - | expression tag |
His 482 | - | expression tag |
Gly 483 | - | expression tag |
Leu 484 | - | expression tag |
Ser 485 | - | expression tag |
Ala 486 | - | expression tag |
Trp 487 | - | expression tag |
Ser 488 | - | expression tag |
His 489 | - | expression tag |
Pro 490 | - | expression tag |
Gln 491 | - | expression tag |
Phe 492 | - | expression tag |
Glu 493 | - | expression tag |
Lys 494 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 451497.2 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 860.8 | |
All* | Total formula weight | 452358.0 |