5V0W
Crystal structure of glycylpeptide N-tetradecanoyltransferase from Plasmodium vivax in complex with inhibitor IMP-0001088
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Glycylpeptide N-tetradecanoyltransferase | polymer | 405 | 47250.9 | 3 | UniProt (A0A1G4HIY1) Pfam (PF01233) Pfam (PF02799) UniProt (by SIFTS) (A5K1A2) In PDB | Plasmodium vivax | |
2 | A, B, C | TETRADECANOYL-COA | non-polymer | 977.9 | 3 | Chemie (MYA) | |||
3 | A, B, C | 1-[5-[3,4-bis(fluoranyl)-2-[2-(1,3,5-trimethylpyrazol-4-yl)ethoxy]phenyl]-1-methyl-indazol-3-yl]-~{N},~{N}-dimethyl-methanamine | non-polymer | 453.5 | 3 | Chemie (KFK) | |||
4 | A, B, C | SULFATE ION | non-polymer | 96.1 | 11 | Chemie (SO4) | |||
5 | A, B, C | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) | |||
6 | water | water | 18.0 | 1676 | Chemie (HOH) |
Sequence modifications
A, B, C: 27 - 410 (UniProt: A0A1G4HIY1)
PDB | External Database | Details |
---|---|---|
Met 6 | - | initiating methionine |
Gly 7 | - | expression tag |
Ser 8 | - | expression tag |
Ser 9 | - | expression tag |
His 10 | - | expression tag |
His 11 | - | expression tag |
His 12 | - | expression tag |
His 13 | - | expression tag |
His 14 | - | expression tag |
His 15 | - | expression tag |
Ser 16 | - | expression tag |
Ala 17 | - | expression tag |
Ala 18 | - | expression tag |
Leu 19 | - | expression tag |
Glu 20 | - | expression tag |
Val 21 | - | expression tag |
Leu 22 | - | expression tag |
Phe 23 | - | expression tag |
Gln 24 | - | expression tag |
Gly 25 | - | expression tag |
Pro 26 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 141752.8 | |
Non-Polymers* | Number of molecules | 22 |
Total formula weight | 5528.2 | |
All* | Total formula weight | 147281.0 |