5V0T
Crystal structure of an alpha,alpha-trehalose-phosphate synthase (UDP-forming) from Burkholderia xenovorans in complex with glucose-6-phosphate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) | polymer | 494 | 55180.9 | 8 | UniProt (Q13W28) Pfam (PF00982) | Burkholderia xenovorans (strain LB400) | Osmoregulatory trehalose synthesis protein A,Trehalose-6-phosphate synthase |
| 2 | CC, EB, I, MA, PB... (H, E, A, C, F...) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 8 | Chemie (UDP) PubChem (1158) PubChem (6031) PubChem (25323044) PubChem (25323048) PubChem (44298965) PubChem (53486216) PubChem (60098857) PubChem (57448939) PubChem (3084486) PubChem (91746160) PubChem (6101632) PubChem (92332560) PubChem (92332561) PubChem (92332562) PubChem (92332563) PubChem (93088131) PubChem (93630083) PubChem (6604175) PubChem (11811538) PubChem (12049241) | |||
| 3 | DC, FB, J, NA, QB... (H, E, A, C, F...) | 6-O-phosphono-alpha-D-glucopyranose | non-polymer | 260.1 | 8 | Chemie (G6P) | |||
| 4 | AC, EC, FC, HB, K... (G, H, E, A, B...) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 15 | Chemie (EDO) | |||
| 5 | AA, BA, BC, CA, DA... (B, G, H, E, A...) | ACETATE ION | non-polymer | 59.0 | 15 | Chemie (ACT) PubChem (175) | |||
| 6 | EA, JB, O, RA, UB (B, E, A, C, F) | OXALIC ACID | non-polymer | 90.0 | 5 | Chemie (OXD) PubChem (971) | |||
| 7 | AB, BB, CB, DB, FA... (D, B, H, E, A...) | FORMIC ACID | non-polymer | 46.0 | 27 | Chemie (FMT) PubChem (284) | |||
| 8 | GB (E) | D(-)-TARTARIC ACID | non-polymer | 150.1 | 1 | Chemie (TAR) | |||
| 9 | JC, KC, LC, MC, NC... (A, B, C, D, E...) | water | water | 18.0 | 2850 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H: 9 - 494 (UniProt: Q13W28)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Ala 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 441446.8 | |
| Non-Polymers* | Number of molecules | 79 |
| Total formula weight | 8974.0 | |
| All* | Total formula weight | 450420.8 |
