5UX0
X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA and target DNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | Argonaute protein | polymer | 642 | 76146.2 | 2 | UniProt (H2J4R4) In PDB | Marinitoga piezophila | |
2 | B, E | RNA (5'-R(*G*GP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*AP*U)-3') | polymer | 21 | 6594.0 | 2 | synthetic construct | ||
3 | C, F | DNA (5'-D(P*AP*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*CP*C)-3') | polymer | 21 | 6542.2 | 2 | synthetic construct |
Sequence modifications
A, D: 2 - 639 (UniProt: H2J4R4)
PDB | External Database | Details |
---|---|---|
Gly -2 | - | expression tag |
Ala -1 | - | expression tag |
Asn 0 | - | expression tag |
Ala 1 | - | expression tag |
Ala 516 | Asp 516 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 178564.9 | |
All* | Total formula weight | 178564.9 |