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5UGP

DNA polymerase beta complex with a 1nt gap and dCMPPNP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (Human)
2B
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
3C
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3')polymer103061.01synthetic construct
4D
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164869.21synthetic construct
5E
(A)
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]cytidinenon-polymer466.21Chemie (8CP)
6F, G
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
7H, I, J, K
(A, D, P, T)
waterwater18.0318Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47707.9
Non-Polymers*Number of molecules3
Total formula weight514.8
All*Total formula weight48222.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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