5UD5
Crystal structure of the tRNA binding domain of Pyrrolysyl-tRNA synthetase bound to tRNA(Pyl)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Pyrrolysine--tRNA ligase | polymer | 109 | 12604.6 | 2 | UniProt (Q8PWY1) In PDB | Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) | Pyrrolysine--tRNA(Pyl) ligase,Pyrrolysyl-tRNA synthetase,PylRS |
2 | C, D | RNA (70-MER) | polymer | 72 | 23114.7 | 2 | GenBank (20986624) | Methanosarcina mazei Go1 | |
3 | A, B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
4 | water | water | 18.0 | 24 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 101 (UniProt: Q8PWY1)
PDB | External Database | Details |
---|---|---|
Met -7 | - | expression tag |
Gly -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 71438.6 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 130.8 | |
All* | Total formula weight | 71569.5 |