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5U7D

PDE2 catalytic domain complexed with inhibitors

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
cGMP-dependent 3',5'-cyclic phosphodiesterasepolymer34540225.13UniProt (O00408)
Pfam (PF00233)
Homo sapiens (Human)Cyclic GMP-stimulated phosphodiesterase,cGSPDE
2D, G, J
(A, B, C)
2-(3,4-dimethoxybenzyl)-7-[(2R,3R)-2-hydroxy-6-phenylhexan-3-yl]-5-methylimidazo[5,1-f][1,2,4]triazin-4(3H)-onenon-polymer476.63Chemie (19F)
3E, H, K
(A, B, C)
ZINC IONnon-polymer65.43Chemie (ZN)
4F, I, L
(A, B, C)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
5M, N, O
(A, B, C)
waterwater18.01010Chemie (HOH)
Sequence modifications
A, B, C: 579 - 919 (UniProt: O00408)
PDBExternal DatabaseDetails
Gly 575-expression tag
Ser 576-expression tag
Ala 577-expression tag
Met 578-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight120675.3
Non-Polymers*Number of molecules9
Total formula weight1698.8
All*Total formula weight122374.1
*Water molecules are not included.

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PDB entries from 2025-12-10

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