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5TZ2

Crystal structure of human CD47 ECD bound to Fab of C47B222

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(H)
C47B222 Fab Heavy Chainpolymer22924643.61Homo sapiens
2B
(L)
C47B222 Fab Light Chainpolymer21423406.11Homo sapiens
3C
(C)
Leukocyte surface antigen CD47polymer12914764.51UniProt (Q08722)
Pfam (PF08204)
Homo sapiens (Human)Antigenic surface determinant protein OA3,Integrin-associated protein,IAP,Protein MER6
4D, E
(A, B)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
5F
(L)
GLYCEROLnon-polymer92.11Chemie (GOL)
6G, H, I
(C)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
7J, K, L
(H, L, C)
waterwater18.0105Chemie (HOH)
Sequence modifications
C: 1 - 123 (UniProt: Q08722)
PDBExternal DatabaseDetails
Gly 15Cys 33engineered mutation
His 124-expression tag
His 125-expression tag
His 126-expression tag
His 127-expression tag
His 128-expression tag
His 129-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight62814.2
BranchedNumber of molecules2
Total formula weight848.8
Non-Polymers*Number of molecules4
Total formula weight755.7
All*Total formula weight64418.7
*Water molecules are not included.

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PDB entries from 2025-06-11

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