5TRW
Crystal structure of Pyridoxamine kinase PDXY from Burkholderia xenovorans
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Pyridoxal kinase PdxY | polymer | 296 | 32466.2 | 1 | UniProt (Q141E8) Pfam (PF08543) In PDB | Burkholderia xenovorans (strain LB400) | PL kinase |
2 | A | NITRATE ION | non-polymer | 62.0 | 2 | Chemie (NO3) | |||
3 | A | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | non-polymer | 207.3 | 1 | Chemie (NHE) | |||
4 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
5 | A | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
6 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
7 | water | water | 18.0 | 307 | Chemie (HOH) |
Sequence modifications
A: 1 - 288 (UniProt: Q141E8)
PDB | External Database | Details |
---|---|---|
Met -7 | - | initiating methionine |
Ala -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 32466.2 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 746.5 | |
All* | Total formula weight | 33212.7 |