5TRW
Crystal structure of Pyridoxamine kinase PDXY from Burkholderia xenovorans
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Pyridoxal kinase PdxY | polymer | 296 | 32466.2 | 1 | UniProt (Q141E8) Pfam (PF08543) | Burkholderia xenovorans (strain LB400) | PL kinase |
| 2 | B, C (A) | NITRATE ION | non-polymer | 62.0 | 2 | Chemie (NO3) | |||
| 3 | D (A) | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | non-polymer | 207.3 | 1 | Chemie (NHE) | |||
| 4 | E (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 5 | F, G (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 6 | H, I, J, K (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 7 | L (A) | water | water | 18.0 | 307 | Chemie (HOH) |
Sequence modifications
A: 1 - 288 (UniProt: Q141E8)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | initiating methionine |
| Ala -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 32466.2 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 746.5 | |
| All* | Total formula weight | 33212.7 |
