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5TPR

Desmethyl-4-deoxygadusol synthase from Anabaena variabilis (Ava_3858) with NAD+ and Zn2+ bound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
3-dehydroquinate synthasepolymer44450134.42UniProt (Q3M6C3)
Pfam (PF01761)
Anabaena variabilis (strain ATCC 29413 / PCC 7937)
2C, J
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
3D, F, G, L, M...
(A, B)
SULFATE IONnon-polymer96.16Chemie (SO4)
4E, K
(A, B)
NICOTINAMIDE-ADENINE-DINUCLEOTIDEnon-polymer663.42Chemie (NAD)
5H, N
(A, B)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
6I, O
(A, B)
GLYCEROLnon-polymer92.12Chemie (GOL)
7Q, R
(A, B)
waterwater18.01294Chemie (HOH)
Sequence modifications
A, B: 1 - 410 (UniProt: Q3M6C3)
PDBExternal DatabaseDetails
Met -33-initiating methionine
Arg -32-expression tag
Gly -31-expression tag
Ser -30-expression tag
His -29-expression tag
His -28-expression tag
His -27-expression tag
His -26-expression tag
His -25-expression tag
His -24-expression tag
Gly -23-expression tag
Met -22-expression tag
Ala -21-expression tag
Ser -20-expression tag
Met -19-expression tag
Thr -18-expression tag
Gly -17-expression tag
Gly -16-expression tag
Gln -15-expression tag
Gln -14-expression tag
Met -13-expression tag
Gly -12-expression tag
Arg -11-expression tag
Asp -10-expression tag
Leu -9-expression tag
Tyr -8-expression tag
Asp -7-expression tag
Asp -6-expression tag
Asp -5-expression tag
Asp -4-expression tag
Lys -3-expression tag
Asp -2-expression tag
Leu -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight100268.9
Non-Polymers*Number of molecules14
Total formula weight2430.5
All*Total formula weight102699.3
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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