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5TKM

Crystal structure of human APOBEC3B N-terminal Domain

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA dC->dU-editing enzyme APOBEC-3Bpolymer19823583.72UniProt (Q9UH17)
Pfam (PF18782)
Homo sapiens (Human)A3B,Phorbolin-1-related protein,Phorbolin-2/3
2C, D
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
3E, F
(A, B)
waterwater18.0234Chemie (HOH)
Sequence modifications
A, B: 1 - 191 (UniProt: Q9UH17)
PDBExternal DatabaseDetails
Gly -6-expression tag
Pro -5-expression tag
Gly -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
Gly -1-expression tag
Gly 0-expression tag
Asp 13Tyr 13engineered mutation
Ser 28Tyr 28engineered mutation
Asp 83Tyr 83engineered mutation
Ser 127Trp 127engineered mutation
Lys 146Thr 146engineered mutation
Asp 162Tyr 162engineered mutation
His 191Tyr 191engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight47167.5
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight47298.3
*Water molecules are not included.

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PDB entries from 2025-07-30

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