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5TKM

Crystal structure of human APOBEC3B N-terminal Domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-10-25
DetectorADSC QUANTUM 315
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths60.739, 60.802, 111.515
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.370 - 1.900
R-factor0.1886
Rwork0.188
R-free0.20270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5k81
RMSD bond length0.007
RMSD bond angle0.793
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.900
Rmerge0.066
Number of reflections33189
<I/σ(I)>29.19
Completeness [%]99.8
Redundancy11.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.62910.01 M Iron (III) chloride hexahydrate, 0.1 M sodium citrate dehydrate pH 5.6, 10% v/v Jeffamine M-600

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