5TJ5

Atomic model for the membrane-embedded motor of a eukaryotic V-ATPase

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	V-type proton ATPase subunit a	polymer	680	70068.0	1	UniProt (P32563) Pfam (PF01496) In PDB	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	V-ATPase a 1 subunit,V-ATPase 95 kDa subunit,Vacuolar pH protein 1,Vacuolar proton pump a subunit,Vacuolar proton translocating ATPase subunit a 1,V-ATPase a 1 subunit,V-ATPase 95 kDa subunit,Vacuolar pH protein 1,Vacuolar proton pump a subunit,Vacuolar proton translocating ATPase subunit a 1,V-ATPase a 1 subunit,V-ATPase 95 kDa subunit,Vacuolar pH protein 1,Vacuolar proton pump a subunit,Vacuolar proton translocating ATPase subunit a 1,V-ATPase a 1 subunit,V-ATPase 95 kDa subunit,Vacuolar pH protein 1,Vacuolar proton pump a subunit,Vacuolar proton translocating ATPase subunit a 1
2	B	V-type proton ATPase subunit c''	polymer	213	22610.6	1	UniProt (P23968) Pfam (PF00137) In PDB	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	V-ATPase subunit c'',V-ATPase 22 kDa proteolipid subunit,Vacuolar proton pump c'' subunit
3	D	V-type proton ATPase subunit c'	polymer	147	15195.3	1	UniProt (P32842) Pfam (PF00137) In PDB	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	V-ATPase subunit c',Proteolipid protein VMA11,Trifluoperazine resistance protein 3,V-ATPase 16 kDa proteolipid subunit 2,Vacuolar proton pump c' subunit
4	E, F, G, H, I...	V-type proton ATPase subunit c	polymer	150	15218.1	8	UniProt (P25515) Pfam (PF00137) In PDB	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	V-ATPase subunit c,Guanine nucleotide exchange factor 2,V-ATPase 16 kDa proteolipid subunit 1,Vacuolar proton pump c subunit
5	L	V-type proton ATPase subunit e	polymer	57	6476.9	1	UniProt (Q3E7B6) Pfam (PF05493) In PDB	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	V-ATPase subunit e,Low dye-binding protein 10,Vacuolar proton pump subunit e
6	O	V-type proton ATPase subunit f	polymer	54	4613.7	1		Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
7	P	V-type proton ATPase subunit d	polymer	297	32854.2	1	UniProt (P32366) Pfam (PF01992) In PDB	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d,V-ATPase subunit d,V-ATPase 39 kDa subunit,V-ATPase subunit M39,Vacuolar proton pump subunit d

Sequence modifications

A: 3 - 365 (PDB: 5TJ5)
A: 400 - 829 (UniProt: P32563)
P: 4 - 136 (UniProt: P32366)
P: 144 - 163 (PDB: 5TJ5)
P: 176 - 201 (UniProt: P32366)
P: 204 - 257 (PDB: 5TJ5)
P: 284 - 341 (UniProt: P32366)

Contents of the asymmetric unit

Polymers	Number of chains	14
	Total formula weight	273563.4
All*	Total formula weight	273563.4

*Water molecules are not included.