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5THR

Cryo-EM structure of a BG505 Env-sCD4-17b-8ANC195 complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, CBG505 SOSIP gp41polymer15317146.53UniProt (Q2N0S6)
Pfam (PF00517)
In PDB
Human immunodeficiency virus 1
2D, E, FBG505 SOSIP gp120polymer48154064.33UniProt (Q2N0S6)
Pfam (PF00516)
In PDB
Human immunodeficiency virus 1
3G, H, IT-cell surface glycoprotein CD4polymer19221472.33UniProt (P01730)
Pfam (PF00047)
Pfam (PF05790)
In PDB
Homo sapiens (Human)T-cell surface antigen T4/Leu-3
4J, K, L17b Fab VL domainpolymer21423399.93Homo sapiens (Human)
5M, N, O17b Fab VH domainpolymer22924457.43Homo sapiens (Human)
6P, R, T8ANC195 G52K5 VH domainpolymer24426125.33Homo sapiens (Human)
7Q, S, U8ANC195 G52K5 VL domainpolymer21523402.03Homo sapiens (Human)
8b, V, Yalpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.73In PDB
GlyTouCan (G81315DD)
9a, c, d, W, X...alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.86In PDB
GlyTouCan (G22768VO)
Sequence modifications
A, B, C: 512 - 664 (UniProt: Q2N0S6)
PDBExternal DatabaseDetails
Pro 559Ile 556conflict
Cys 605Thr 602conflict
D, E, F: 31 - 508 (UniProt: Q2N0S6)
PDBExternal DatabaseDetails
Asn 332Thr 330conflict
Cys 501Ala 498conflict
Arg 509-expression tag
Arg 510-expression tag
Arg 511-expression tag
Arg 512-expression tag
Arg 513-expression tag
G, H, I: 1 - 182 (UniProt: P01730)
PDBExternal DatabaseDetails
Ile 183-expression tag
Asp 184-expression tag
Gly 185-expression tag
Arg 186-expression tag
His 187-expression tag
His 188-expression tag
His 189-expression tag
His 190-expression tag
His 191-expression tag
His 192-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains21
Total formula weight570202.9
BranchedNumber of molecules9
Total formula weight7711.0
All*Total formula weight577913.9
*Water molecules are not included.

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PDB entries from 2024-08-07

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