5TDB
Crystal structure of the human UBR-box domain from UBR2 in complex with asymmetrically double methylated arginine peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | E3 ubiquitin-protein ligase UBR2 | polymer | 76 | 8350.5 | 1 | UniProt (Q8IWV8) Pfam (PF02207) | Homo sapiens (Human) | N-recognin-2,Ubiquitin-protein ligase E3-alpha-2,Ubiquitin-protein ligase E3-alpha-II |
| 2 | B (B) | DA2-ILE-PHE-SER peptide | polymer | 4 | 549.7 | 1 | Homo sapiens | ||
| 3 | C, D, E (A) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 4 | F (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 5 | G, H (A, B) | water | water | 18.0 | 54 | Chemie (HOH) |
Sequence modifications
A: 98 - 168 (UniProt: Q8IWV8)
| PDB | External Database | Details |
|---|---|---|
| Gly 93 | - | expression tag |
| Pro 94 | - | expression tag |
| Leu 95 | - | expression tag |
| Gly 96 | - | expression tag |
| Ser 97 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 8900.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 258.3 | |
| All* | Total formula weight | 9158.5 |
