5T7G
Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PT9) of HIV gp120 MN Isolate (IGPGRAFYT)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, C) | H-2 class I histocompatibility antigen, D-D alpha chain | polymer | 275 | 32005.6 | 2 | UniProt (P01900) Pfam (PF00129) Pfam (PF07654) | Mus musculus (Mouse) | H-2D(D) |
| 2 | B, E (B, D) | Beta-2-microglobulin | polymer | 100 | 11791.5 | 2 | UniProt (P01887) Pfam (PF07654) | Mus musculus (Mouse) | |
| 3 | C, F (P, Q) | Peptide (PT9) of HIV gp120 MN isolate (IGPGRAFYT) | polymer | 9 | 982.1 | 2 | UniProt (by SIFTS) (P05877) | Human immunodeficiency virus type 1 group M subtype B (isolate MN) | |
| 4 | G, H, I, J, K... (A, B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 12 | Chemie (EDO) | |||
| 5 | S, T, U, V, W... (A, B, P, C, D...) | water | water | 18.0 | 384 | Chemie (HOH) |
Sequence modifications
B, D: 1 - 99 (UniProt: P01887)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 89558.5 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 744.8 | |
| All* | Total formula weight | 90303.3 |
