5SZM
Protocadherin gamma A8 extracellular cadherin domains 1-4
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | PcdhgA8 or protocadherin gamma A8 | polymer | 426 | 47545.1 | 1 | UniProt (Q91XY0) Pfam (PF08266) Pfam (PF00028) | Mus musculus (Mouse) | Protein Pcdhga8,Protocadherin gamma A8,Protocadherin gamma subfamily A,8 |
| 2 | B (B) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 3 | C (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 4 | D, E, F, G, H... (A) | CALCIUM ION | non-polymer | 40.1 | 9 | Chemie (CA) | |||
| 5 | M, N (A) | alpha-D-mannopyranose | non-polymer | 180.2 | 2 | Chemie (MAN) |
Sequence modifications
A: 1 - 425 (UniProt: Q91XY0)
| PDB | External Database | Details |
|---|---|---|
| His 419 | Asn 448 | conflict |
| His 420 | Pro 449 | conflict |
| His 421 | Pro 450 | conflict |
| His 422 | Arg 451 | conflict |
| His 423 | Phe 452 | conflict |
| His 424 | Ser 453 | conflict |
| His 426 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 47545.1 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1157.1 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 721.0 | |
| All* | Total formula weight | 49423.1 |
