5SZL
Protocadherin gamma A1 extracellular cadherin domains 1-4
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | PROTOCADHERIN GAMMA A1 EXTRACELLULAR CADHERIN DOMAINS 1-4, Protein Pcdhga1 | polymer | 427 | 47330.7 | 4 | UniProt (A0A0A6YW27) Pfam (PF08266) Pfam (PF00028) UniProt (by SIFTS) (Q91XZ0) In PDB | Mus musculus (Mouse) | |
2 | E | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
3 | F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
4 | G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
5 | C, A, D, B | alpha-D-mannopyranose | non-polymer | 180.2 | 8 | Chemie (MAN) | |||
6 | B, D, C, A | CALCIUM ION | non-polymer | 40.1 | 36 | Chemie (CA) | |||
7 | D, B, C, A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 5 | Chemie (NAG) |
Sequence modifications
A, B, C, D: 1 - 419 (UniProt: A0A0A6YW27)
PDB | External Database | Details |
---|---|---|
His 420 | - | expression tag |
His 421 | - | expression tag |
His 422 | - | expression tag |
His 423 | - | expression tag |
His 424 | - | expression tag |
His 425 | - | expression tag |
His 426 | - | expression tag |
His 427 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 189322.9 | |
Branched | Number of molecules | 3 |
Total formula weight | 1743.6 | |
Non-Polymers* | Number of molecules | 49 |
Total formula weight | 3990.1 | |
All* | Total formula weight | 195056.6 |