5SZL
Protocadherin gamma A1 extracellular cadherin domains 1-4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-24 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 107.867, 107.867, 463.081 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.960 - 4.200 |
R-factor | 0.2879 |
Rwork | 0.287 |
R-free | 0.31360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zi9 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.822 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 4.540 |
High resolution limit [Å] | 4.200 | 4.200 |
Rmerge | 0.379 | 2.646 |
Number of reflections | 23885 | |
<I/σ(I)> | 3.1 | 1.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 3.6 | 3.6 |
CC(1/2) | 0.991 | 0.318 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 7 | 295 | 8% (w/v) PEG8000, 16% ethylene glycol, 20% Morpheus Amino Acids (Molecular Dimensions), 0.1 M Morpheus Buffer System 2 (Hepes/MOPS buffer; Molecular Dimensions) pH 7.0 |