5ORG
Structure of the periplasmic binding protein (PBP) OccJ from A. tumefaciens B6 in complex with octopine.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Octopine-binding periplasmic protein | polymer | 263 | 27992.9 | 2 | UniProt (P0A4F8) Pfam (PF00497) | Agrobacterium tumefaciens str. B6 | |
| 2 | AA, BA, C, CA, D... (B, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 7 | Chemie (EDO) | |||
| 3 | E, F, FA, G, GA... (A, B) | SODIUM ION | non-polymer | 23.0 | 9 | Chemie (NA) | |||
| 4 | HA, IA, JA, KA, L... (B, A) | CHLORIDE ION | non-polymer | 35.5 | 14 | Chemie (CL) | |||
| 5 | LA, V (B, A) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 6 | MA, W (B, A) | octopine | non-polymer | 246.3 | 2 | Chemie (6DB) | |||
| 7 | NA, OA, PA, X, Y... (B, A) | ACETATE ION | non-polymer | 59.0 | 6 | Chemie (ACT) | |||
| 8 | QA, RA (A, B) | water | water | 18.0 | 243 | Chemie (HOH) |
Sequence modifications
A, B: 21 - 276 (UniProt: P0A4F8)
| PDB | External Database | Details |
|---|---|---|
| Met 20 | - | initiating methionine |
| His 277 | - | expression tag |
| His 278 | - | expression tag |
| His 279 | - | expression tag |
| His 280 | - | expression tag |
| His 281 | - | expression tag |
| His 282 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 55985.7 | |
| Non-Polymers* | Number of molecules | 40 |
| Total formula weight | 2168.7 | |
| All* | Total formula weight | 58154.4 |






