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5OPM

Crystal structure of D52N/R238W cN-II mutant bound to dATP and free phosphate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cytosolic purine 5'-nucleotidasepolymer47855352.31UniProt (P49902)
Pfam (PF05761)
Homo sapiens (Human)Cytosolic 5'-nucleotidase II
2B
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
3C, D
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
4E
(A)
2'-DEOXYADENOSINE 5'-TRIPHOSPHATEnon-polymer491.21Chemie (DTP)
5F, G, H, I
(A)
GLYCEROLnon-polymer92.14Chemie (GOL)
6J
(A)
waterwater18.0351Chemie (HOH)
Sequence modifications
A: 3 - 488 (UniProt: P49902)
PDBExternal DatabaseDetails
Asn 52Asp 52engineered mutation
Trp 238Arg 238engineered mutation
-Ser 409deletion
-Ser 410deletion
-Asn 411deletion
-Glu 412deletion
-Arg 413deletion
-Pro 414deletion
-Asp 415deletion
-Ile 416deletion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight55352.3
Non-Polymers*Number of molecules8
Total formula weight1003.1
All*Total formula weight56355.4
*Water molecules are not included.

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PDB entries from 2026-01-14

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