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5OPM

Crystal structure of D52N/R238W cN-II mutant bound to dATP and free phosphate

Functional Information from PDB Data
site_idAC1
Number of Residues12
Detailsbinding site for residue PO4 A 501
ChainResidue
AASN52
AHOH654
AHOH715
AHOH806
AMET53
AASP54
ATHR249
AASN250
ASER251
ALYS292
AMG502
AHOH627

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 502
ChainResidue
AASN52
AASP54
AASP351
APO4501
AHOH627
AHOH654

site_idAC3
Number of Residues3
Detailsbinding site for residue MG A 503
ChainResidue
ALYS362
ADTP504
ADTP504

site_idAC4
Number of Residues16
Detailsbinding site for residue DTP A 504
ChainResidue
AARG144
AASP145
AASN154
APHE354
ALEU358
ALYS362
ALYS362
AGLN453
AARG456
AARG456
ATYR457
AMG503
AMG503
AHOH608
AHOH662
AHOH796

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL A 505
ChainResidue
AARG34
AVAL35
AVAL37
ATYR475
AARG478
AHOH825

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 506
ChainResidue
APHE157
AARG202
AVAL205
AASP206
ATYR210
AHOH666
AHOH675
AHOH726

site_idAC7
Number of Residues4
Detailsbinding site for residue GOL A 507
ChainResidue
ALEU119
ATHR427
ASER443
AARG446

site_idAC8
Number of Residues11
Detailsbinding site for residue GOL A 508
ChainResidue
AASP54
ATYR65
APHE157
AHIS209
ATYR210
ALYS215
ASER251
ATYR255
AHOH609
AHOH647
AHOH726

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17405878","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2J2C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JC9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JCM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XCV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XCW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJE","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XJB","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XJC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XCV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XCW","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17405878","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2J2C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JC9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JCM","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17405878","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2JC9","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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