5OLR
Rhamnogalacturonan lyase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Rhamnogalacturonan lyase | polymer | 522 | 56980.4 | 3 | UniProt (A0A139KMS2) Pfam (PF22842) Pfam (PF16380) UniProt (by SIFTS) (Q8A051) | Bacteroides thetaiotaomicron | |
| 2 | D, E, F (D, E, F) | alpha-L-rhamnopyranose-(1-4)-alpha-D-galactopyranuronic acid-(1-2)-alpha-L-rhamnopyranose | branched | 486.4 | 3 | In PDB GlyTouCan (G70933BG) | |||
| 3 | G, K, N (A, B, C) | PHOSPHATE ION | non-polymer | 95.0 | 3 | Chemie (PO4) | |||
| 4 | H, I, L, M, O... (A, B, C) | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 5 | J (A) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 6 | Q, R, S (A, B, C) | water | water | 18.0 | 1757 | Chemie (HOH) |
Sequence modifications
A, B, C: 24 - 535 (UniProt: A0A139KMS2)
| PDB | External Database | Details |
|---|---|---|
| Met 22 | - | initiating methionine |
| Gly 23 | - | expression tag |
| Leu 536 | - | expression tag |
| Glu 537 | - | expression tag |
| His 538 | - | expression tag |
| His 539 | - | expression tag |
| His 540 | - | expression tag |
| His 541 | - | expression tag |
| His 542 | - | expression tag |
| His 543 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 170941.2 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1459.3 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 675.6 | |
| All* | Total formula weight | 173076.0 |
