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5OHJ

Human phosphodiesterase 4B catalytic domain in complex with a pyrrolidinyl inhibitor.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BcAMP-specific 3',5'-cyclic phosphodiesterase 4Bpolymer42148442.72UniProt (Q07343)
Pfam (PF18100)
Pfam (PF00233)
In PDB
Homo sapiens (Human)DPDE4,PDE32
2A, BZINC IONnon-polymer65.42Chemie (ZN)
3A, BMAGNESIUM IONnon-polymer24.32Chemie (MG)
4A, B[(1~{S})-2-[3,5-bis(chloranyl)-1-oxidanyl-pyridin-1-ium-4-yl]-1-[4-[bis(fluoranyl)methoxy]-3-(cyclopropylmethoxy)phenyl]ethyl] (2~{S})-1-[3-(dimethylcarbamoyl)phenyl]sulfonylpyrrolidine-2-carboxylatenon-polymer729.62Chemie (9VE)
5waterwater18.0165Chemie (HOH)
Sequence modifications
A, B: 246 - 659 (UniProt: Q07343)
PDBExternal DatabaseDetails
Met 245-initiating methionine
Lys 295Ser 290conflict
Val 296Pro 291conflict
-Gln 293deletion
-Lys 294deletion
-Asp 295deletion
-Arg 296deletion
-Glu 297deletion
Ala 298Lys 298conflict
Glu 299Lys 299conflict
Glu 300Lys 300conflict
Ala 301Lys 301conflict
Pro 302Gln 302conflict
Pro 304Leu 304conflict
His 660-expression tag
His 661-expression tag
His 662-expression tag
His 663-expression tag
His 664-expression tag
His 665-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight96885.4
Non-Polymers*Number of molecules6
Total formula weight1638.6
All*Total formula weight98524.0
*Water molecules are not included.

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PDB entries from 2024-06-12

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