5OBM
Crystal structure of Gentamicin bound to the yeast 80S ribosome
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, BC (1, 5) | 25S ribosomal RNA | polymer | 3396 | 1097493.9 | 2 | REF (831416132) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 2 | B, CC (3, 7) | 5S Ribosomal RNA | polymer | 121 | 38951.1 | 2 | GenBank (1039024380) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 3 | C, DC (4, 8) | 5.8S ribosomal RNA | polymer | 158 | 50682.9 | 2 | GenBank (1179788147) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 4 | D, EC (L2, l2) | 60S ribosomal protein L2-A | polymer | 252 | 27217.3 | 2 | UniProt (P0CX45) Pfam (PF00181) Pfam (PF03947) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L5,Large ribosomal subunit protein uL2-A,RP8,YL6 |
| 5 | E, FC (L3, l3) | 60S ribosomal protein L3 | polymer | 386 | 43719.6 | 2 | UniProt (P14126) Pfam (PF00297) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein uL3,Maintenance of killer protein 8,RP1,Trichodermin resistance protein,YL1 |
| 6 | F, GC (L4, l4) | 60S ribosomal protein L4-A | polymer | 361 | 39027.9 | 2 | UniProt (P10664) Pfam (PF00573) Pfam (PF14374) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L2,Large ribosomal subunit protein uL4-A,RP2,YL2 |
| 7 | G, HC (L5, l5) | 60S ribosomal protein L5 | polymer | 296 | 33633.6 | 2 | UniProt (P26321) Pfam (PF17144) Pfam (PF14204) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L1,L1a,Large ribosomal subunit protein uL18,Ribosomal 5S RNA-binding protein,YL3 |
| 8 | H, IC (L6, l6) | 60S ribosomal protein L6-A | polymer | 176 | 20000.6 | 2 | UniProt (Q02326) Pfam (PF01159) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L17,Large ribosomal subunit protein eL6-A,RP18,YL16 |
| 9 | I, JC (L7, l7) | 60S ribosomal protein L7-A | polymer | 223 | 25341.5 | 2 | UniProt (P05737) Pfam (PF08079) Pfam (PF00327) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L6,Large ribosomal subunit protein uL30-A,RP11,YL8 |
| 10 | J, KC (L8, l8) | 60S ribosomal protein L8-A | polymer | 233 | 25815.0 | 2 | UniProt (P17076) Pfam (PF01248) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5 |
| 11 | K, LC (L9, l9) | 60S ribosomal protein L9-A | polymer | 191 | 21605.1 | 2 | UniProt (P05738) Pfam (PF00347) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L8,Large ribosomal subunit protein uL6-A,RP24,YL11 |
| 12 | L, MC (M0, m0) | 60S ribosomal protein L10 | polymer | 221 | 25410.5 | 2 | UniProt (P41805) Pfam (PF00252) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L9,Large ribosomal subunit protein uL16,Ubiquinol-cytochrome C reductase complex subunit VI-requiring protein |
| 13 | M, NC (M1, m1) | 60S ribosomal protein L11-B | polymer | 169 | 19266.1 | 2 | UniProt (Q3E757) Pfam (PF00281) Pfam (PF00673) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L16,Large ribosomal subunit protein uL5-B,RP39,YL22 |
| 14 | N, PC (M3, m3) | 60S ribosomal protein L13-A | polymer | 194 | 21956.3 | 2 | UniProt (Q12690) Pfam (PF01294) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL13-A |
| 15 | O, QC (M4, m4) | 60S ribosomal protein L14-A | polymer | 137 | 15063.9 | 2 | UniProt (P36105) Pfam (PF00467) Pfam (PF01929) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL14-A |
| 16 | P, RC (M5, m5) | 60S ribosomal protein L15-A | polymer | 203 | 24351.2 | 2 | UniProt (P05748) Pfam (PF00827) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18 |
| 17 | Q, SC (M6, m6) | 60S ribosomal protein L16-A | polymer | 197 | 22029.0 | 2 | UniProt (P26784) Pfam (PF00572) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15 |
| 18 | R, TC (M7, m7) | 60S ribosomal protein L17-A | polymer | 184 | 20589.5 | 2 | UniProt (P05740) Pfam (PF00237) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L20A,Large ribosomal subunit protein uL22-A,YL17 |
| 19 | S, UC (M8, m8) | 60S ribosomal protein L18-A | polymer | 185 | 20478.1 | 2 | UniProt (P0CX49) Pfam (PF17135) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL18-A,RP28 |
| 20 | T, VC (M9, m9) | 60S ribosomal protein L19-A | polymer | 188 | 21631.1 | 2 | UniProt (P0CX82) Pfam (PF01280) Pfam (PF25476) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L23,Large ribosomal subunit protein eL19-A,RP15L,RP33,YL14 |
| 21 | U, WC (N0, n0) | 60S ribosomal protein L20-A | polymer | 172 | 20478.9 | 2 | UniProt (P0CX23) Pfam (PF01775) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L18a,Large ribosomal subunit protein eL20-A |
| 22 | V, XC (N1, n1) | 60S ribosomal protein L21-A | polymer | 159 | 18148.1 | 2 | UniProt (Q02753) Pfam (PF01157) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL21-A |
| 23 | W, YC (N2, n2) | 60S ribosomal protein L22-A | polymer | 100 | 11263.9 | 2 | UniProt (P05749) Pfam (PF01776) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L1c,Large ribosomal subunit protein eL22-A,RP4,YL31 |
| 24 | X, ZC (N3, n3) | 60S ribosomal protein L23-A | polymer | 136 | 14362.8 | 2 | UniProt (P0CX41) Pfam (PF00238) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L17a,Large ribosomal subunit protein uL14-A,YL32 |
| 25 | Y (N4) | 60S ribosomal protein L24-A | polymer | 155 | 17661.7 | 1 | UniProt (P04449) Pfam (PF01246) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L30,Large ribosomal subunit protein eL24-A,RP29,YL21 |
| 26 | BD, Z (N5, n5) | 60S ribosomal protein L25 | polymer | 121 | 13771.2 | 2 | UniProt (P04456) Pfam (PF03939) Pfam (PF00276) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein uL23,RP16L,YL25,YP42' |
| 27 | AA, CD (N6, n6) | 60S ribosomal protein L26-A | polymer | 126 | 14134.6 | 2 | UniProt (P05743) Pfam (PF16906) Pfam (PF00467) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L33,Large ribosomal subunit protein uL24-A,YL33 |
| 28 | BA, DD (N7, n7) | 60S ribosomal protein L27-A | polymer | 135 | 15437.2 | 2 | UniProt (P0C2H6) Pfam (PF01777) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL27-A |
| 29 | CA, ED (N8, n8) | 60S ribosomal protein L28 | polymer | 148 | 16630.5 | 2 | UniProt (P02406) Pfam (PF00828) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L27a,L29,Large ribosomal subunit protein uL15,RP44,RP62,YL24 |
| 30 | DA, FD (N9, n9) | 60S ribosomal protein L29 | polymer | 58 | 6560.7 | 2 | UniProt (P05747) Pfam (PF01779) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL29,YL43 |
| 31 | EA, GD (O0, o0) | 60S ribosomal protein L30 | polymer | 100 | 10902.7 | 2 | UniProt (P14120) Pfam (PF01248) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L32,Large ribosomal subunit protein eL30,RP73,YL38 |
| 32 | FA, HD (O1, o1) | 60S ribosomal protein L31-A | polymer | 109 | 12649.8 | 2 | UniProt (P0C2H8) Pfam (PF01198) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L34,Large ribosomal subunit protein eL31-A,YL28 |
| 33 | GA, ID (O2, o2) | 60S ribosomal protein L32 | polymer | 127 | 14478.1 | 2 | UniProt (P38061) Pfam (PF01655) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL32 |
| 34 | HA, JD (O3, o3) | 60S ribosomal protein L33-A | polymer | 106 | 12045.9 | 2 | UniProt (P05744) Pfam (PF01247) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L37,Large ribosomal subunit protein eL33-A,RP47,YL37 |
| 35 | IA, KD (O4, o4) | 60S ribosomal protein L34-A | polymer | 112 | 12608.8 | 2 | UniProt (P87262) Pfam (PF01199) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL34-A |
| 36 | JA, LD (O5, o5) | 60S ribosomal protein L35-A | polymer | 119 | 13811.4 | 2 | UniProt (P0CX84) Pfam (PF00831) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein uL29-A |
| 37 | KA, MD (O6, o6) | 60S ribosomal protein L36-A | polymer | 99 | 11020.1 | 2 | UniProt (P05745) Pfam (PF01158) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L39,Large ribosomal subunit protein eL36-A,YL39 |
| 38 | LA, ND (O7, o7) | 60S ribosomal protein L37-A | polymer | 87 | 9746.2 | 2 | UniProt (P49166) Pfam (PF01907) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L43,Large ribosomal subunit protein eL37-A,YL35,YP55 |
| 39 | MA, OD (O8, o8) | 60S ribosomal protein L38 | polymer | 77 | 8714.4 | 2 | UniProt (P49167) Pfam (PF01781) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL38 |
| 40 | NA, PD (O9, o9) | 60S ribosomal protein L39 | polymer | 50 | 6227.4 | 2 | UniProt (P04650) Pfam (PF00832) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L46,Large ribosomal subunit protein eL39,YL40 |
| 41 | OA, SD (Q0, q0) | Ubiquitin-60S ribosomal protein L40 | polymer | 52 | 6032.3 | 2 | UniProt (P0CH08) Pfam (PF01020) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | |
| 42 | PA, TD (Q1, q1) | 60S ribosomal protein L41-A | polymer | 25 | 3354.2 | 2 | UniProt (P0CX86) Pfam (PF05162) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L47,Large ribosomal subunit protein eL41-A,YL41 |
| 43 | QA, UD (Q2, q2) | 60S ribosomal protein L42-A | polymer | 105 | 12115.5 | 2 | UniProt (P0CX27) Pfam (PF00935) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L41,Large ribosomal subunit protein eL42-A,YL27,YP44 |
| 44 | RA, VD (Q3, q3) | 60S ribosomal protein L43-A | polymer | 91 | 9981.8 | 2 | UniProt (P0CX25) Pfam (PF01780) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L37a,Large ribosomal subunit protein eL43-A,YL35 |
| 45 | SA, WD (2, 6) | 18S ribosomal RNA | polymer | 1800 | 579761.9 | 2 | REF (831416132) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 46 | TA, XD (S0, s0) | 40S ribosomal protein S0-A | polymer | 206 | 22811.1 | 2 | UniProt (P32905) Pfam (PF00318) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Nucleic acid-binding protein NAB1A,Small ribosomal subunit protein uS2-A |
| 47 | UA, YD (S1, s1) | 40S ribosomal protein S1-A | polymer | 216 | 24498.4 | 2 | UniProt (P33442) Pfam (PF01015) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP10A,Small ribosomal subunit protein eS1-A |
| 48 | VA, ZD (S2, s2) | 40S ribosomal protein S2 | polymer | 217 | 23213.0 | 2 | UniProt (P25443) Pfam (PF00333) Pfam (PF03719) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Omnipotent suppressor protein SUP44,RP12,S4,Small ribosomal subunit protein uS5,YS5 |
| 49 | AE, WA (S3, s3) | 40S ribosomal protein S3 | polymer | 223 | 24702.8 | 2 | UniProt (P05750) Pfam (PF07650) Pfam (PF00189) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP13,Small ribosomal subunit protein uS3,YS3 |
| 50 | BE, XA (S4, s4) | 40S ribosomal protein S4-A | polymer | 260 | 29338.1 | 2 | UniProt (P0CX35) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP5,S7,Small ribosomal subunit protein eS4-A,YS6 |
| 51 | CE, YA (S5, s5) | 40S ribosomal protein S5 | polymer | 206 | 22908.3 | 2 | UniProt (P26783) Pfam (PF00177) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP14,S2,Small ribosomal subunit protein uS7,YS8 |
| 52 | DE, ZA (S6, s6) | 40S ribosomal protein S6-A | polymer | 236 | 27054.5 | 2 | UniProt (P0CX37) Pfam (PF01092) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP9,S10,Small ribosomal subunit protein eS6-A,YS4 |
| 53 | AB, EE (S7, s7) | 40S ribosomal protein S7-A | polymer | 186 | 21158.6 | 2 | UniProt (P26786) Pfam (PF01251) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP30,RP40,Small ribosomal subunit protein eS7-A |
| 54 | BB, FE (S8, s8) | 40S ribosomal protein S8-A | polymer | 200 | 22537.8 | 2 | UniProt (P0CX39) Pfam (PF01201) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP19,S14,Small ribosomal subunit protein eS8-A,YS9 |
| 55 | CB, GE (S9, s9) | 40S ribosomal protein S9-A | polymer | 185 | 21210.7 | 2 | UniProt (O13516) Pfam (PF00163) Pfam (PF01479) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP21,S13,Small ribosomal subunit protein uS4-A,YP28,YS11 |
| 56 | DB, HE (C0, c0) | 40S ribosomal protein S10-A | polymer | 105 | 12757.4 | 2 | UniProt (Q08745) Pfam (PF03501) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS10-A |
| 57 | EB, IE (C1, c1) | 40S ribosomal protein S11-A | polymer | 156 | 17785.9 | 2 | UniProt (P0CX47) Pfam (PF16205) Pfam (PF00366) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP41,S18,Small ribosomal subunit protein uS17-A,YS12 |
| 58 | FB, JE (C2, c2) | 40S ribosomal protein S12 | polymer | 143 | 15488.6 | 2 | UniProt (P48589) Pfam (PF01248) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS12 |
| 59 | GB, KE (C3, c3) | 40S ribosomal protein S13 | polymer | 150 | 16928.7 | 2 | UniProt (P05756) Pfam (PF08069) Pfam (PF00312) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S27a,Small ribosomal subunit protein uS15,YS15 |
| 60 | HB, LE (C4, c4) | 40S ribosomal protein S14-B | polymer | 128 | 13560.5 | 2 | UniProt (P39516) Pfam (PF00411) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP59B,Small ribosomal subunit protein uS11-B |
| 61 | IB, ME (C5, c5) | 40S ribosomal protein S15 | polymer | 141 | 15900.7 | 2 | UniProt (Q01855) Pfam (PF00203) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RIG protein,RP52,S21,Small ribosomal subunit protein uS19,YS21 |
| 62 | JB, NE (C6, c6) | 40S ribosomal protein S16-A | polymer | 142 | 15746.3 | 2 | UniProt (P0CX51) Pfam (PF00380) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP61R,Small ribosomal subunit protein uS9-A |
| 63 | KB, OE (C7, c7) | 40S ribosomal protein S17-A | polymer | 136 | 15820.4 | 2 | UniProt (P02407) Pfam (PF00833) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP51A,Small ribosomal subunit protein eS17-A |
| 64 | LB, PE (C8, c8) | 40S ribosomal protein S18-A | polymer | 145 | 16940.4 | 2 | UniProt (P0CX55) Pfam (PF00416) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein uS13-A |
| 65 | MB, QE (C9, c9) | 40S ribosomal protein S19-A | polymer | 143 | 15810.9 | 2 | UniProt (P07280) Pfam (PF01090) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP55A,S16a,Small ribosomal subunit protein eS19-A,YP45,YS16A |
| 66 | NB, RE (D0, d0) | 40S ribosomal protein S20 | polymer | 110 | 12575.5 | 2 | UniProt (P38701) Pfam (PF00338) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein uS10 |
| 67 | OB, SE (D1, d1) | 40S ribosomal protein S21-A | polymer | 87 | 9758.8 | 2 | UniProt (P0C0V8) Pfam (PF01249) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S26,Small ribosomal subunit protein eS21-A,YS25 |
| 68 | PB, TE (D2, d2) | 40S ribosomal protein S22-A | polymer | 129 | 14518.9 | 2 | UniProt (P0C0W1) Pfam (PF00410) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP50,S24,Small ribosomal subunit protein uS8-A,YP58,YS22 |
| 69 | QB, UE (D3, d3) | 40S ribosomal protein S23-A | polymer | 144 | 15942.7 | 2 | UniProt (P0CX29) Pfam (PF00164) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP37,S28,Small ribosomal subunit protein uS12-A,YS14 |
| 70 | RB, VE (D4, d4) | 40S ribosomal protein S24-A | polymer | 134 | 15231.6 | 2 | UniProt (P0CX31) Pfam (PF01282) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP50,Small ribosomal subunit protein eS24-A |
| 71 | SB, WE (D5, d5) | 40S ribosomal protein S25-A | polymer | 70 | 8001.4 | 2 | UniProt (Q3E792) Pfam (PF03297) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP45,S31,Small ribosomal subunit protein eS25-A,YS23 |
| 72 | TB, XE (D6, d6) | 40S ribosomal protein S26-B | polymer | 97 | 11023.0 | 2 | UniProt (P39939) Pfam (PF01283) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS26-B |
| 73 | UB, YE (D7, d7) | 40S ribosomal protein S27-A | polymer | 81 | 8762.2 | 2 | UniProt (P35997) Pfam (PF01667) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP61,Small ribosomal subunit protein eS27-A,YS20 |
| 74 | VB, ZE (D8, d8) | 40S ribosomal protein S28-A | polymer | 63 | 7116.3 | 2 | UniProt (Q3E7X9) Pfam (PF01200) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S33,Small ribosomal subunit protein eS28-A,YS27 |
| 75 | AF, WB (D9, d9) | 40S ribosomal protein S29-A | polymer | 53 | 6335.3 | 2 | UniProt (P41057) Pfam (PF00253) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S36,Small ribosomal subunit protein uS14-A,YS29 |
| 76 | BF, XB (E0, e0) | 40S ribosomal protein S30-A | polymer | 62 | 7006.3 | 2 | UniProt (P0CX33) Pfam (PF04758) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS30-A |
| 77 | CF, YB (E1, e1) | Ubiquitin-40S ribosomal protein S31 | polymer | 72 | 8230.9 | 2 | UniProt (P05759) Pfam (PF01599) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | |
| 78 | DF, ZB (SR, sR) | Guanine nucleotide-binding protein subunit beta-like protein | polymer | 318 | 34651.9 | 2 | UniProt (P38011) Pfam (PF00400) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Receptor for activated C kinase,Receptor of activated protein kinase C 1,RACK1,Small ribosomal subunit protein RACK1 |
| 79 | AC, EF (SM, sM) | Suppressor protein STM1 | polymer | 272 | 29916.8 | 2 | UniProt (P39015) Pfam (PF09598) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | 3BP1,GU4 nucleic-binding protein 2,G4p2 protein,POP2 multicopy suppressor protein 4,Ribosomal subunits association factor,AF,TOM1 suppressor protein 1,Triplex-binding protein 1 |
| 80 | OC (m2) | 60S ribosomal protein L12 | polymer | 165 | 14060.3 | 1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||
| 81 | AD (n4) | 60S ribosomal protein L24-A | polymer | 135 | 15506.2 | 1 | UniProt (P04449) Pfam (PF01246) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L30,Large ribosomal subunit protein eL24-A,RP29,YL21 |
| 82 | QD (p0) | 60S acidic ribosomal protein P0 | polymer | 312 | 33749.1 | 1 | UniProt (P05317) Pfam (PF00466) Pfam (PF17777) Pfam (PF00428) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | A0,L10e,Large ribosomal subunit protein uL10 |
| 83 | RD (p1) | Ribosomal protein P1 alpha | polymer | 47 | 4017.9 | 1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||
| 84 | AAA, AAB, AAC, ABA, ABB... (1, 5, 6, 3, 4...) | MAGNESIUM ION | non-polymer | 24.3 | 2066 | Chemie (MG) PubChem (888) | |||
| 85 | ACA, AIC, ARB, BCA, BIC... (1, 6, 5, 4, 3...) | (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL | non-polymer | 449.5 | 69 | Chemie (LLL) PubChem (20849271) PubChem (72396) PubChem (21596406) PubChem (44416734) PubChem (25028320) PubChem (582362) PubChem (44445797) PubChem (3084091) PubChem (59018967) PubChem (68213805) PubChem (71308339) PubChem (71316867) PubChem (71777446) PubChem (86576339) PubChem (71146640) PubChem (6604485) PubChem (12799065) PubChem (12799066) PubChem (91713764) PubChem (91820520) PubChem (129628713) PubChem (138107751) PubChem (139025066) PubChem (139217327) PubChem (175674193) | |||
| 86 | BHA, DNA, DXB, ENA, FNA... (Q3, D6, o4, D7, D9...) | ZINC ION | non-polymer | 65.4 | 18 | Chemie (ZN) | |||
| 87 | AKC, ALC, AMC, BKC, BLC... (1, S3, n8, 3, S4...) | water | water | 18.0 | 1558 | Chemie (HOH) |
Sequence modifications
SR, sR: 2 - 319 (UniProt: P38011)
| PDB | External Database | Details |
|---|---|---|
| Ala 161 | Lys 161 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 161 |
| Total formula weight | 6192489.6 | |
| Non-Polymers* | Number of molecules | 2153 |
| Total formula weight | 82409.9 | |
| All* | Total formula weight | 6274899.5 |
