5OBM
Crystal structure of Gentamicin bound to the yeast 80S ribosome
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, BC (1, 5) | 25S ribosomal RNA | polymer | 3396 | 1097493.9 | 2 | REF (831416132) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 2 | B, CC (3, 7) | 5S Ribosomal RNA | polymer | 121 | 38951.1 | 2 | GenBank (1039024380) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 3 | C, DC (4, 8) | 5.8S ribosomal RNA | polymer | 158 | 50682.9 | 2 | GenBank (1179788147) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 4 | D, EC (L2, l2) | 60S ribosomal protein L2-A | polymer | 252 | 27217.3 | 2 | UniProt (P0CX45) Pfam (PF00181) Pfam (PF03947) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L5,Large ribosomal subunit protein uL2-A,RP8,YL6 |
| 5 | E, FC (L3, l3) | 60S ribosomal protein L3 | polymer | 386 | 43719.6 | 2 | UniProt (P14126) Pfam (PF00297) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein uL3,Maintenance of killer protein 8,RP1,Trichodermin resistance protein,YL1 |
| 6 | F, GC (L4, l4) | 60S ribosomal protein L4-A | polymer | 361 | 39027.9 | 2 | UniProt (P10664) Pfam (PF00573) Pfam (PF14374) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L2,Large ribosomal subunit protein uL4-A,RP2,YL2 |
| 7 | G, HC (L5, l5) | 60S ribosomal protein L5 | polymer | 296 | 33633.6 | 2 | UniProt (P26321) Pfam (PF17144) Pfam (PF14204) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L1,L1a,Large ribosomal subunit protein uL18,Ribosomal 5S RNA-binding protein,YL3 |
| 8 | H, IC (L6, l6) | 60S ribosomal protein L6-A | polymer | 176 | 20000.6 | 2 | UniProt (Q02326) Pfam (PF01159) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L17,Large ribosomal subunit protein eL6-A,RP18,YL16 |
| 9 | I, JC (L7, l7) | 60S ribosomal protein L7-A | polymer | 223 | 25341.5 | 2 | UniProt (P05737) Pfam (PF08079) Pfam (PF00327) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L6,Large ribosomal subunit protein uL30-A,RP11,YL8 |
| 10 | J, KC (L8, l8) | 60S ribosomal protein L8-A | polymer | 233 | 25815.0 | 2 | UniProt (P17076) Pfam (PF01248) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5 |
| 11 | K, LC (L9, l9) | 60S ribosomal protein L9-A | polymer | 191 | 21605.1 | 2 | UniProt (P05738) Pfam (PF00347) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L8,Large ribosomal subunit protein uL6-A,RP24,YL11 |
| 12 | L, MC (M0, m0) | 60S ribosomal protein L10 | polymer | 221 | 25410.5 | 2 | UniProt (P41805) Pfam (PF00252) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L9,Large ribosomal subunit protein uL16,Ubiquinol-cytochrome C reductase complex subunit VI-requiring protein |
| 13 | M, NC (M1, m1) | 60S ribosomal protein L11-B | polymer | 169 | 19266.1 | 2 | UniProt (Q3E757) Pfam (PF00281) Pfam (PF00673) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L16,Large ribosomal subunit protein uL5-B,RP39,YL22 |
| 14 | N, PC (M3, m3) | 60S ribosomal protein L13-A | polymer | 194 | 21956.3 | 2 | UniProt (Q12690) Pfam (PF01294) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL13-A |
| 15 | O, QC (M4, m4) | 60S ribosomal protein L14-A | polymer | 137 | 15063.9 | 2 | UniProt (P36105) Pfam (PF00467) Pfam (PF01929) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL14-A |
| 16 | P, RC (M5, m5) | 60S ribosomal protein L15-A | polymer | 203 | 24351.2 | 2 | UniProt (P05748) Pfam (PF00827) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18 |
| 17 | Q, SC (M6, m6) | 60S ribosomal protein L16-A | polymer | 197 | 22029.0 | 2 | UniProt (P26784) Pfam (PF00572) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15 |
| 18 | R, TC (M7, m7) | 60S ribosomal protein L17-A | polymer | 184 | 20589.5 | 2 | UniProt (P05740) Pfam (PF00237) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L20A,Large ribosomal subunit protein uL22-A,YL17 |
| 19 | S, UC (M8, m8) | 60S ribosomal protein L18-A | polymer | 185 | 20478.1 | 2 | UniProt (P0CX49) Pfam (PF17135) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL18-A,RP28 |
| 20 | T, VC (M9, m9) | 60S ribosomal protein L19-A | polymer | 188 | 21631.1 | 2 | UniProt (P0CX82) Pfam (PF01280) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L23,Large ribosomal subunit protein eL19-A,RP15L,RP33,YL14 |
| 21 | U, WC (N0, n0) | 60S ribosomal protein L20-A | polymer | 172 | 20478.9 | 2 | UniProt (P0CX23) Pfam (PF01775) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L18a,Large ribosomal subunit protein eL20-A |
| 22 | V, XC (N1, n1) | 60S ribosomal protein L21-A | polymer | 159 | 18148.1 | 2 | UniProt (Q02753) Pfam (PF01157) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL21-A |
| 23 | W, YC (N2, n2) | 60S ribosomal protein L22-A | polymer | 100 | 11263.9 | 2 | UniProt (P05749) Pfam (PF01776) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L1c,Large ribosomal subunit protein eL22-A,RP4,YL31 |
| 24 | X, ZC (N3, n3) | 60S ribosomal protein L23-A | polymer | 136 | 14362.8 | 2 | UniProt (P0CX41) Pfam (PF00238) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L17a,Large ribosomal subunit protein uL14-A,YL32 |
| 25 | Y (N4) | 60S ribosomal protein L24-A | polymer | 155 | 17661.7 | 1 | UniProt (P04449) Pfam (PF01246) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L30,Large ribosomal subunit protein eL24-A,RP29,YL21 |
| 26 | BD, Z (N5, n5) | 60S ribosomal protein L25 | polymer | 121 | 13771.2 | 2 | UniProt (P04456) Pfam (PF03939) Pfam (PF00276) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein uL23,RP16L,YL25,YP42' |
| 27 | AA, CD (N6, n6) | 60S ribosomal protein L26-A | polymer | 126 | 14134.6 | 2 | UniProt (P05743) Pfam (PF16906) Pfam (PF00467) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L33,Large ribosomal subunit protein uL24-A,YL33 |
| 28 | BA, DD (N7, n7) | 60S ribosomal protein L27-A | polymer | 135 | 15437.2 | 2 | UniProt (P0C2H6) Pfam (PF01777) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL27-A |
| 29 | CA, ED (N8, n8) | 60S ribosomal protein L28 | polymer | 148 | 16630.5 | 2 | UniProt (P02406) Pfam (PF00828) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L27a,L29,Large ribosomal subunit protein uL15,RP44,RP62,YL24 |
| 30 | DA, FD (N9, n9) | 60S ribosomal protein L29 | polymer | 58 | 6560.7 | 2 | UniProt (P05747) Pfam (PF01779) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL29,YL43 |
| 31 | EA, GD (O0, o0) | 60S ribosomal protein L30 | polymer | 100 | 10902.7 | 2 | UniProt (P14120) Pfam (PF01248) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L32,Large ribosomal subunit protein eL30,RP73,YL38 |
| 32 | FA, HD (O1, o1) | 60S ribosomal protein L31-A | polymer | 109 | 12649.8 | 2 | UniProt (P0C2H8) Pfam (PF01198) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L34,Large ribosomal subunit protein eL31-A,YL28 |
| 33 | GA, ID (O2, o2) | 60S ribosomal protein L32 | polymer | 127 | 14478.1 | 2 | UniProt (P38061) Pfam (PF01655) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL32 |
| 34 | HA, JD (O3, o3) | 60S ribosomal protein L33-A | polymer | 106 | 12045.9 | 2 | UniProt (P05744) Pfam (PF01247) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L37,Large ribosomal subunit protein eL33-A,RP47,YL37 |
| 35 | IA, KD (O4, o4) | 60S ribosomal protein L34-A | polymer | 112 | 12608.8 | 2 | UniProt (P87262) Pfam (PF01199) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL34-A |
| 36 | JA, LD (O5, o5) | 60S ribosomal protein L35-A | polymer | 119 | 13811.4 | 2 | UniProt (P0CX84) Pfam (PF00831) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein uL29-A |
| 37 | KA, MD (O6, o6) | 60S ribosomal protein L36-A | polymer | 99 | 11020.1 | 2 | UniProt (P05745) Pfam (PF01158) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L39,Large ribosomal subunit protein eL36-A,YL39 |
| 38 | LA, ND (O7, o7) | 60S ribosomal protein L37-A | polymer | 87 | 9746.2 | 2 | UniProt (P49166) Pfam (PF01907) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L43,Large ribosomal subunit protein eL37-A,YL35,YP55 |
| 39 | MA, OD (O8, o8) | 60S ribosomal protein L38 | polymer | 77 | 8714.4 | 2 | UniProt (P49167) Pfam (PF01781) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Large ribosomal subunit protein eL38 |
| 40 | NA, PD (O9, o9) | 60S ribosomal protein L39 | polymer | 50 | 6227.4 | 2 | UniProt (P04650) Pfam (PF00832) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L46,Large ribosomal subunit protein eL39,YL40 |
| 41 | OA, SD (Q0, q0) | Ubiquitin-60S ribosomal protein L40 | polymer | 52 | 6032.3 | 2 | UniProt (P0CH08) Pfam (PF01020) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | |
| 42 | PA, TD (Q1, q1) | 60S ribosomal protein L41-A | polymer | 25 | 3354.2 | 2 | UniProt (P0CX86) Pfam (PF05162) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L47,Large ribosomal subunit protein eL41-A,YL41 |
| 43 | QA, UD (Q2, q2) | 60S ribosomal protein L42-A | polymer | 105 | 12115.5 | 2 | UniProt (P0CX27) Pfam (PF00935) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L41,Large ribosomal subunit protein eL42-A,YL27,YP44 |
| 44 | RA, VD (Q3, q3) | 60S ribosomal protein L43-A | polymer | 91 | 9981.8 | 2 | UniProt (P0CX25) Pfam (PF01780) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L37a,Large ribosomal subunit protein eL43-A,YL35 |
| 45 | SA, WD (2, 6) | 18S ribosomal RNA | polymer | 1800 | 579761.9 | 2 | REF (831416132) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | |
| 46 | TA, XD (S0, s0) | 40S ribosomal protein S0-A | polymer | 206 | 22811.1 | 2 | UniProt (P32905) Pfam (PF00318) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Nucleic acid-binding protein NAB1A,Small ribosomal subunit protein uS2-A |
| 47 | UA, YD (S1, s1) | 40S ribosomal protein S1-A | polymer | 216 | 24498.4 | 2 | UniProt (P33442) Pfam (PF01015) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP10A,Small ribosomal subunit protein eS1-A |
| 48 | VA, ZD (S2, s2) | 40S ribosomal protein S2 | polymer | 217 | 23213.0 | 2 | UniProt (P25443) Pfam (PF00333) Pfam (PF03719) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Omnipotent suppressor protein SUP44,RP12,S4,Small ribosomal subunit protein uS5,YS5 |
| 49 | AE, WA (S3, s3) | 40S ribosomal protein S3 | polymer | 223 | 24702.8 | 2 | UniProt (P05750) Pfam (PF07650) Pfam (PF00189) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP13,Small ribosomal subunit protein uS3,YS3 |
| 50 | BE, XA (S4, s4) | 40S ribosomal protein S4-A | polymer | 260 | 29338.1 | 2 | UniProt (P0CX35) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP5,S7,Small ribosomal subunit protein eS4-A,YS6 |
| 51 | CE, YA (S5, s5) | 40S ribosomal protein S5 | polymer | 206 | 22908.3 | 2 | UniProt (P26783) Pfam (PF00177) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP14,S2,Small ribosomal subunit protein uS7,YS8 |
| 52 | DE, ZA (S6, s6) | 40S ribosomal protein S6-A | polymer | 236 | 27054.5 | 2 | UniProt (P0CX37) Pfam (PF01092) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP9,S10,Small ribosomal subunit protein eS6-A,YS4 |
| 53 | AB, EE (S7, s7) | 40S ribosomal protein S7-A | polymer | 186 | 21158.6 | 2 | UniProt (P26786) Pfam (PF01251) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP30,RP40,Small ribosomal subunit protein eS7-A |
| 54 | BB, FE (S8, s8) | 40S ribosomal protein S8-A | polymer | 200 | 22537.8 | 2 | UniProt (P0CX39) Pfam (PF01201) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP19,S14,Small ribosomal subunit protein eS8-A,YS9 |
| 55 | CB, GE (S9, s9) | 40S ribosomal protein S9-A | polymer | 185 | 21210.7 | 2 | UniProt (O13516) Pfam (PF00163) Pfam (PF01479) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP21,S13,Small ribosomal subunit protein uS4-A,YP28,YS11 |
| 56 | DB, HE (C0, c0) | 40S ribosomal protein S10-A | polymer | 105 | 12757.4 | 2 | UniProt (Q08745) Pfam (PF03501) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS10-A |
| 57 | EB, IE (C1, c1) | 40S ribosomal protein S11-A | polymer | 156 | 17785.9 | 2 | UniProt (P0CX47) Pfam (PF16205) Pfam (PF00366) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP41,S18,Small ribosomal subunit protein uS17-A,YS12 |
| 58 | FB, JE (C2, c2) | 40S ribosomal protein S12 | polymer | 143 | 15488.6 | 2 | UniProt (P48589) Pfam (PF01248) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS12 |
| 59 | GB, KE (C3, c3) | 40S ribosomal protein S13 | polymer | 150 | 16928.7 | 2 | UniProt (P05756) Pfam (PF08069) Pfam (PF00312) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S27a,Small ribosomal subunit protein uS15,YS15 |
| 60 | HB, LE (C4, c4) | 40S ribosomal protein S14-B | polymer | 128 | 13560.5 | 2 | UniProt (P39516) Pfam (PF00411) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP59B,Small ribosomal subunit protein uS11-B |
| 61 | IB, ME (C5, c5) | 40S ribosomal protein S15 | polymer | 141 | 15900.7 | 2 | UniProt (Q01855) Pfam (PF00203) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RIG protein,RP52,S21,Small ribosomal subunit protein uS19,YS21 |
| 62 | JB, NE (C6, c6) | 40S ribosomal protein S16-A | polymer | 142 | 15746.3 | 2 | UniProt (P0CX51) Pfam (PF00380) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP61R,Small ribosomal subunit protein uS9-A |
| 63 | KB, OE (C7, c7) | 40S ribosomal protein S17-A | polymer | 136 | 15820.4 | 2 | UniProt (P02407) Pfam (PF00833) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP51A,Small ribosomal subunit protein eS17-A |
| 64 | LB, PE (C8, c8) | 40S ribosomal protein S18-A | polymer | 145 | 16940.4 | 2 | UniProt (P0CX55) Pfam (PF00416) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein uS13-A |
| 65 | MB, QE (C9, c9) | 40S ribosomal protein S19-A | polymer | 143 | 15810.9 | 2 | UniProt (P07280) Pfam (PF01090) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP55A,S16a,Small ribosomal subunit protein eS19-A,YP45,YS16A |
| 66 | NB, RE (D0, d0) | 40S ribosomal protein S20 | polymer | 110 | 12575.5 | 2 | UniProt (P38701) Pfam (PF00338) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein uS10 |
| 67 | OB, SE (D1, d1) | 40S ribosomal protein S21-A | polymer | 87 | 9758.8 | 2 | UniProt (P0C0V8) Pfam (PF01249) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S26,Small ribosomal subunit protein eS21-A,YS25 |
| 68 | PB, TE (D2, d2) | 40S ribosomal protein S22-A | polymer | 129 | 14518.9 | 2 | UniProt (P0C0W1) Pfam (PF00410) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP50,S24,Small ribosomal subunit protein uS8-A,YP58,YS22 |
| 69 | QB, UE (D3, d3) | 40S ribosomal protein S23-A | polymer | 144 | 15942.7 | 2 | UniProt (P0CX29) Pfam (PF00164) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP37,S28,Small ribosomal subunit protein uS12-A,YS14 |
| 70 | RB, VE (D4, d4) | 40S ribosomal protein S24-A | polymer | 134 | 15231.6 | 2 | UniProt (P0CX31) Pfam (PF01282) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP50,Small ribosomal subunit protein eS24-A |
| 71 | SB, WE (D5, d5) | 40S ribosomal protein S25-A | polymer | 70 | 8001.4 | 2 | UniProt (Q3E792) Pfam (PF03297) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP45,S31,Small ribosomal subunit protein eS25-A,YS23 |
| 72 | TB, XE (D6, d6) | 40S ribosomal protein S26-B | polymer | 97 | 11023.0 | 2 | UniProt (P39939) Pfam (PF01283) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS26-B |
| 73 | UB, YE (D7, d7) | 40S ribosomal protein S27-A | polymer | 81 | 8762.2 | 2 | UniProt (P35997) Pfam (PF01667) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | RP61,Small ribosomal subunit protein eS27-A,YS20 |
| 74 | VB, ZE (D8, d8) | 40S ribosomal protein S28-A | polymer | 63 | 7116.3 | 2 | UniProt (Q3E7X9) Pfam (PF01200) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S33,Small ribosomal subunit protein eS28-A,YS27 |
| 75 | AF, WB (D9, d9) | 40S ribosomal protein S29-A | polymer | 53 | 6335.3 | 2 | UniProt (P41057) Pfam (PF00253) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | S36,Small ribosomal subunit protein uS14-A,YS29 |
| 76 | BF, XB (E0, e0) | 40S ribosomal protein S30-A | polymer | 62 | 7006.3 | 2 | UniProt (P0CX33) Pfam (PF04758) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Small ribosomal subunit protein eS30-A |
| 77 | CF, YB (E1, e1) | Ubiquitin-40S ribosomal protein S31 | polymer | 72 | 8230.9 | 2 | UniProt (P05759) Pfam (PF01599) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | |
| 78 | DF, ZB (SR, sR) | Guanine nucleotide-binding protein subunit beta-like protein | polymer | 318 | 34651.9 | 2 | UniProt (P38011) Pfam (PF00400) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Receptor for activated C kinase,Receptor of activated protein kinase C 1,RACK1,Small ribosomal subunit protein RACK1 |
| 79 | AC, EF (SM, sM) | Suppressor protein STM1 | polymer | 272 | 29916.8 | 2 | UniProt (P39015) Pfam (PF09598) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | 3BP1,GU4 nucleic-binding protein 2,G4p2 protein,POP2 multicopy suppressor protein 4,Ribosomal subunits association factor,AF,TOM1 suppressor protein 1,Triplex-binding protein 1 |
| 80 | OC (m2) | 60S ribosomal protein L12 | polymer | 165 | 14060.3 | 1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||
| 81 | AD (n4) | 60S ribosomal protein L24-A | polymer | 135 | 15506.2 | 1 | UniProt (P04449) Pfam (PF01246) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | L30,Large ribosomal subunit protein eL24-A,RP29,YL21 |
| 82 | QD (p0) | 60S acidic ribosomal protein P0 | polymer | 312 | 33749.1 | 1 | UniProt (P05317) Pfam (PF00466) Pfam (PF17777) Pfam (PF00428) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | A0,L10e,Large ribosomal subunit protein uL10 |
| 83 | RD (p1) | Ribosomal protein P1 alpha | polymer | 47 | 4017.9 | 1 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||
| 84 | AAA, AAB, AAC, ABA, ABB... (1, 5, 6, 3, 4...) | MAGNESIUM ION | non-polymer | 24.3 | 2066 | Chemie (MG) | |||
| 85 | ACA, AIC, ARB, BCA, BIC... (1, 6, 5, 4, 3...) | (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL | non-polymer | 449.5 | 69 | Chemie (LLL) | |||
| 86 | BHA, DNA, DXB, ENA, FNA... (Q3, D6, o4, D7, D9...) | ZINC ION | non-polymer | 65.4 | 18 | Chemie (ZN) | |||
| 87 | AKC, ALC, AMC, BKC, BLC... (1, S3, n8, 3, S4...) | water | water | 18.0 | 1558 | Chemie (HOH) |
Sequence modifications
SR, sR: 2 - 319 (UniProt: P38011)
| PDB | External Database | Details |
|---|---|---|
| Ala 161 | Lys 161 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 161 |
| Total formula weight | 6192489.6 | |
| Non-Polymers* | Number of molecules | 2153 |
| Total formula weight | 82409.9 | |
| All* | Total formula weight | 6274899.5 |
