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5O02

GII.17 Kawasaki323 protruding domain in complex with Nanobody Nano-4

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Capsid proteinpolymer30834085.91UniProt (A0A0A7CJV4)
Pfam (PF08435)
Norovirus 13-BH-1/2013/GII.17
2B
(C)
Nanobody (VHH) Nano-4polymer12413587.01Vicugna pacos (alpaca)
3C, D, E, F, G...
(A, C)
1,2-ETHANEDIOLnon-polymer62.16Chemie (EDO)
4I
(C)
IMIDAZOLEnon-polymer69.11Chemie (IMD)
5J, K
(A, C)
waterwater18.0515Chemie (HOH)
Sequence modifications
A: 225 - 528 (UniProt: A0A0A7CJV4)
PDBExternal DatabaseDetails
Gly 221-expression tag
Pro 222-expression tag
Gly 223-expression tag
Ser 224-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight47672.9
Non-Polymers*Number of molecules7
Total formula weight441.5
All*Total formula weight48114.4
*Water molecules are not included.

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PDB entries from 2025-12-10

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