5NZS
The structure of the COPI coat leaf in complex with the ArfGAP2 uncoating factor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Coatomer subunit alpha | polymer | 1262 | 142532.8 | 1 | UniProt (Q8CIE6) Pfam (PF00400) Pfam (PF04053) Pfam (PF06957) In PDB | Mus musculus (House Mouse) | Alpha-coat protein,Alpha-COP |
| 2 | B | Coatomer subunit beta | polymer | 968 | 109148.1 | 1 | UniProt (Q9JIF7) Pfam (PF07718) Pfam (PF14806) Pfam (PF01602) In PDB | Mus musculus (House Mouse) | Beta-coat protein,Beta-COP |
| 3 | C | Coatomer subunit beta' | polymer | 905 | 102566.1 | 1 | UniProt (O55029) Pfam (PF00400) Pfam (PF04053) In PDB | Mus musculus (House Mouse) | Beta'-coat protein,Beta'-COP,p102 |
| 4 | D | Coatomer subunit delta | polymer | 511 | 57304.3 | 1 | UniProt (Q5XJY5) Pfam (PF01217) Pfam (PF00928) In PDB | Mus musculus (House Mouse) | Archain,Delta-coat protein,Delta-COP |
| 5 | F, R, M | ADP-ribosylation factor 1 | polymer | 181 | 20552.4 | 3 | UniProt (P11076) Pfam (PF00025) In PDB | Saccharomyces cerevisiae (Baker's yeast) | |
| 6 | G, K | Coatomer subunit gamma-1 | polymer | 874 | 97622.7 | 2 | UniProt (Q9QZE5) Pfam (PF01602) Pfam (PF08752) Pfam (PF16381) In PDB | Mus musculus (House Mouse) | Gamma-1-coat protein,Gamma-1-COP |
| 7 | Z, L | Coatomer subunit zeta-1 | polymer | 177 | 20218.2 | 2 | UniProt (P61924) Pfam (PF01217) In PDB | Mus musculus (House Mouse) | Zeta-1-coat protein,Zeta-1 COP |
| 8 | P | ADP-ribosylation factor GTPase-activating protein 2 | polymer | 520 | 56629.2 | 1 | UniProt (Q3MID3) Pfam (PF01412) In PDB | Rattus norvegicus (Norway Rat) | ARF GAP 2,GTPase-activating protein ZNF289,Zinc finger protein 289 |
Sequence modifications
A: 1 - 1224 (UniProt: Q8CIE6)
B: 16 - 968 (UniProt: Q9JIF7)
| PDB | External Database | Details |
|---|---|---|
| Leu 1225 | - | expression tag |
| Glu 1226 | - | expression tag |
| Val 1227 | - | expression tag |
| Leu 1228 | - | expression tag |
| Phe 1229 | - | expression tag |
| Gln 1230 | - | expression tag |
| Gly 1231 | - | expression tag |
| Pro 1232 | - | expression tag |
| Ser 1233 | - | expression tag |
| Ala 1234 | - | expression tag |
| Trp 1235 | - | expression tag |
| Ser 1236 | - | expression tag |
| His 1237 | - | expression tag |
| Pro 1238 | - | expression tag |
| Gln 1239 | - | expression tag |
| Phe 1240 | - | expression tag |
| Glu 1241 | - | expression tag |
| Lys 1242 | - | expression tag |
| Gly 1243 | - | expression tag |
| Gly 1244 | - | expression tag |
| Gly 1245 | - | expression tag |
| Ser 1246 | - | expression tag |
| Gly 1247 | - | expression tag |
| Gly 1248 | - | expression tag |
| Gly 1249 | - | expression tag |
| Ser 1250 | - | expression tag |
| Gly 1251 | - | expression tag |
| Gly 1252 | - | expression tag |
| Ser 1253 | - | expression tag |
| Ala 1254 | - | expression tag |
| Trp 1255 | - | expression tag |
| Ser 1256 | - | expression tag |
| His 1257 | - | expression tag |
| Pro 1258 | - | expression tag |
| Gln 1259 | - | expression tag |
| Phe 1260 | - | expression tag |
| Glu 1261 | - | expression tag |
| Lys 1262 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| His 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| Glu 8 | - | expression tag |
| Asn 9 | - | expression tag |
| Leu 10 | - | expression tag |
| Tyr 11 | - | expression tag |
| Phe 12 | - | expression tag |
| Gln 13 | - | expression tag |
| Gly 14 | - | expression tag |
| His 15 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 765519.5 | |
| All* | Total formula weight | 765519.5 |
