5NPF
Crystal structure of txGH116 (beta-glucosidase from Thermoanaerobacterium xylolyticum) in complex with beta Cyclophellitol Cyclosulfate probe ME594
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Glucosylceramidase | polymer | 798 | 91723.1 | 1 | UniProt (F6BL85) Pfam (PF12215) Pfam (PF04685) | Thermoanaerobacterium xylanolyticum | txGH116 |
| 2 | B, C, D, E, F... (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 13 | Chemie (EDO) | |||
| 3 | O (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 4 | P (A) | [(1~{R},2~{R},3~{R},4~{S},5~{R})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate | non-polymer | 274.2 | 1 | Chemie (945) | |||
| 5 | Q (A) | water | water | 18.0 | 567 | Chemie (HOH) |
Sequence modifications
A: 19 - 806 (UniProt: F6BL85)
| PDB | External Database | Details |
|---|---|---|
| Met 17 | - | initiating methionine |
| Ala 18 | - | expression tag |
| Leu 807 | - | expression tag |
| Glu 808 | - | expression tag |
| His 809 | - | expression tag |
| His 810 | - | expression tag |
| His 811 | - | expression tag |
| His 812 | - | expression tag |
| His 813 | - | expression tag |
| His 814 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 91723.1 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1121.2 | |
| All* | Total formula weight | 92844.3 |
