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5NPF

Crystal structure of txGH116 (beta-glucosidase from Thermoanaerobacterium xylolyticum) in complex with beta Cyclophellitol Cyclosulfate probe ME594

Functional Information from GO Data
ChainGOidnamespacecontents
A0004348molecular_functionglucosylceramidase activity
A0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
A0005975biological_processcarbohydrate metabolic process
A0006680biological_processglucosylceramide catabolic process
A0008422molecular_functionbeta-glucosidase activity
A0016020cellular_componentmembrane
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue EDO A 901
ChainResidue
ATHR45
AGLU50
ATYR764
ALYS766

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 902
ChainResidue
AGLY362
ALYS363
AASN364
AHOH1020
AHOH1122

site_idAC3
Number of Residues7
Detailsbinding site for residue EDO A 903
ChainResidue
AVAL124
AGLN126
ALYS142
APRO146
AASN165
AASP167
AHOH1348

site_idAC4
Number of Residues7
Detailsbinding site for residue EDO A 904
ChainResidue
ATRP595
ASER596
APHE654
ASER658
AHIS660
AASP722
ASER724

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 905
ChainResidue
ALYS397
ALYS708
ATYR757
ALYS761

site_idAC6
Number of Residues4
Detailsbinding site for residue EDO A 906
ChainResidue
AGLU245
AILE277
ATYR279
AASN304

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO A 907
ChainResidue
APHE443
AASP444
ATYR513
AHOH1051
AHOH1296
AHOH1339

site_idAC8
Number of Residues7
Detailsbinding site for residue EDO A 908
ChainResidue
AMET218
AGLY220
APHE221
APHE222
ATRP261
ATYR265
ALEU342

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO A 909
ChainResidue
AARG432
ATHR433
AASN434
AHOH1285

site_idAD1
Number of Residues7
Detailsbinding site for residue EDO A 910
ChainResidue
AGLN225
ALYS235
AGLU264
ALYS366
ASER368
APHE369
AHOH1355

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO A 911
ChainResidue
ATRP647
AHIS688
AHOH1166

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 912
ChainResidue
AASP676
ATYR745
AARG746
AHOH1031

site_idAD4
Number of Residues4
Detailsbinding site for residue EDO A 913
ChainResidue
AILE518
ALYS519
AILE520
AHOH1067

site_idAD5
Number of Residues7
Detailsbinding site for residue CA A 914
ChainResidue
AASP575
AASP577
AASP579
AILE581
AASP583
AHOH1047
AHOH1077

site_idAD6
Number of Residues14
Detailsbinding site for residue 945 A 915
ChainResidue
AGLU441
ATYR445
ATHR450
AASP452
AHIS507
ATYR523
ATRP531
ATHR591
AASP593
AGLU777
AARG786
ATYR790
AARG792
AHOH1337

227344

PDB entries from 2024-11-13

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