5NGM
2.9S structure of the 70S ribosome composing the S. aureus 100S complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (Aa) | 16S ribosomal RNA | polymer | 1555 | 502975.9 | 1 | GenBank (1133392934) | Staphylococcus aureus | |
| 2 | B (Ab) | 30S ribosomal protein S2 | polymer | 255 | 29136.4 | 1 | UniProt (A0A077UDU1) Pfam (PF00318) | Staphylococcus aureus | |
| 3 | C (Ac) | 30S ribosomal protein S3 | polymer | 217 | 24143.9 | 1 | UniProt (A0A077UU26) Pfam (PF07650) Pfam (PF00189) | Staphylococcus aureus | |
| 4 | D (Ad) | 30S ribosomal protein S4 | polymer | 200 | 23051.4 | 1 | UniProt (W8TVK2) Pfam (PF00163) Pfam (PF01479) | Staphylococcus aureus | |
| 5 | E (Ae) | 30S ribosomal protein S5 | polymer | 166 | 17770.5 | 1 | UniProt (W8TUC9) Pfam (PF00333) Pfam (PF03719) | Staphylococcus aureus | |
| 6 | F (Af) | 30S ribosomal protein S6 | polymer | 98 | 11613.1 | 1 | UniProt (W8TPC6) Pfam (PF01250) | Staphylococcus aureus | |
| 7 | G (Ag) | 30S ribosomal protein S7 | polymer | 156 | 17826.6 | 1 | UniProt (A0A077VHU6) Pfam (PF00177) | Staphylococcus aureus | |
| 8 | H (Ah) | 30S ribosomal protein S8 | polymer | 132 | 14854.3 | 1 | UniProt (W8U8T8) Pfam (PF00410) | Staphylococcus aureus | |
| 9 | I (Ai) | 30S ribosomal protein S9 | polymer | 132 | 14857.0 | 1 | UniProt (A0A0K7UQP6) Pfam (PF00380) | Staphylococcus aureus | |
| 10 | J (Aj) | 30S ribosomal protein S10 | polymer | 102 | 11598.5 | 1 | UniProt (A0A0H2K0A0) Pfam (PF00338) | Staphylococcus aureus | |
| 11 | K (Ak) | 30S ribosomal protein S11 | polymer | 129 | 13908.0 | 1 | UniProt (A0A077UKD6) Pfam (PF00411) | Staphylococcus aureus | |
| 12 | L (Al) | 30S ribosomal protein S12 | polymer | 137 | 15320.9 | 1 | UniProt (W8U1C6) Pfam (PF00164) | Staphylococcus aureus | |
| 13 | M (Am) | 30S ribosomal protein S13 | polymer | 121 | 13747.9 | 1 | UniProt (W8U8U6) Pfam (PF00416) | Staphylococcus aureus | |
| 14 | N (An) | 30S ribosomal protein S14 type Z | polymer | 61 | 7317.8 | 1 | UniProt (A0A077UGW7) Pfam (PF00253) | Staphylococcus aureus | |
| 15 | O (Ao) | 30S ribosomal protein S15 | polymer | 89 | 10634.3 | 1 | UniProt (W8U6H8) Pfam (PF00312) | Staphylococcus aureus | |
| 16 | P (Ap) | 30S ribosomal protein S16 | polymer | 91 | 10253.9 | 1 | UniProt (W8U6K4) Pfam (PF00886) | Staphylococcus aureus | |
| 17 | Q (Aq) | 30S ribosomal protein S17 | polymer | 87 | 10196.9 | 1 | UniProt (A0A077VLD5) Pfam (PF00366) | Staphylococcus aureus | |
| 18 | R (Ar) | 30S ribosomal protein S18 | polymer | 80 | 9332.0 | 1 | UniProt (A0A077UZF4) Pfam (PF01084) | Staphylococcus aureus | |
| 19 | S (As) | 30S ribosomal protein S19 | polymer | 92 | 10639.3 | 1 | UniProt (A0A077V0P8) Pfam (PF00203) | Staphylococcus aureus | |
| 20 | T (At) | 30S ribosomal protein S20 | polymer | 83 | 9039.5 | 1 | UniProt (W8UXC3) Pfam (PF01649) | Staphylococcus aureus | |
| 21 | U (Au) | 30S ribosomal protein S21 | polymer | 58 | 6994.3 | 1 | UniProt (A0A077UHS1) Pfam (PF01165) | Staphylococcus aureus | |
| 22 | V (Av) | Ribosome hibernation promoting factor | polymer | 190 | 22244.9 | 1 | UniProt (W8USK0) Pfam (PF02482) Pfam (PF16321) UniProt (by SIFTS) (D2Z097) | Staphylococcus aureus | HPF |
| 23 | W (AA) | 23S Ribosomal RNA | polymer | 2923 | 946697.6 | 1 | GenBank (610395799) | Staphylococcus aureus | |
| 24 | X (AB) | 5S Ribosomal RNA | polymer | 115 | 36974.9 | 1 | GenBank (1130374198) | Staphylococcus aureus | |
| 25 | Y (AC) | 50S ribosomal protein L2 | polymer | 277 | 30217.2 | 1 | UniProt (A0A077W1J0) Pfam (PF00181) Pfam (PF03947) | Staphylococcus aureus | |
| 26 | Z (AD) | 50S ribosomal protein L3 | polymer | 220 | 23760.3 | 1 | UniProt (W8U3W0) Pfam (PF00297) | Staphylococcus aureus | |
| 27 | AA (AE) | 50S ribosomal protein L4 | polymer | 207 | 22495.7 | 1 | UniProt (W8TRC7) Pfam (PF00573) | Staphylococcus aureus | |
| 28 | BA (AF) | 50S ribosomal protein L5 | polymer | 179 | 20296.6 | 1 | UniProt (W8TUC3) Pfam (PF00673) Pfam (PF00281) | Staphylococcus aureus | |
| 29 | CA (AG) | 50S ribosomal protein L6 | polymer | 178 | 19818.6 | 1 | UniProt (W8U3X2) Pfam (PF00347) | Staphylococcus aureus | |
| 30 | DA (AH) | 50S ribosomal protein L13 | polymer | 145 | 16359.4 | 1 | UniProt (W8TUE6) Pfam (PF00572) | Staphylococcus aureus | |
| 31 | EA (AI) | 50S ribosomal protein L14 | polymer | 122 | 13157.3 | 1 | UniProt (A0A077UUA0) Pfam (PF00238) | Staphylococcus aureus | |
| 32 | FA (AJ) | 50S ribosomal protein L15 | polymer | 146 | 15628.9 | 1 | UniProt (A0A077UGA7) Pfam (PF00828) | Staphylococcus aureus | |
| 33 | GA (AK) | 50S ribosomal protein L16 | polymer | 144 | 16274.0 | 1 | UniProt (A0A077V4G0) Pfam (PF00252) | Staphylococcus aureus | |
| 34 | HA (AL) | 50S ribosomal protein L17 | polymer | 122 | 13771.8 | 1 | UniProt (A0A077UG91) Pfam (PF01196) | Staphylococcus aureus | |
| 35 | IA (AM) | 50S ribosomal protein L18 | polymer | 119 | 13124.1 | 1 | UniProt (W8TRE0) Pfam (PF00861) | Staphylococcus aureus | |
| 36 | JA (AN) | 50S ribosomal protein L19 | polymer | 116 | 13392.8 | 1 | UniProt (A0A077UVB6) Pfam (PF01245) | Staphylococcus aureus | |
| 37 | KA (AO) | 50S ribosomal protein L20 | polymer | 118 | 13720.3 | 1 | UniProt (A0A077VMP6) Pfam (PF00453) | Staphylococcus aureus | |
| 38 | LA (AP) | 50S ribosomal protein L21 | polymer | 102 | 11354.1 | 1 | UniProt (D7URR3) Pfam (PF00829) | Staphylococcus aureus | |
| 39 | MA (AQ) | 50S ribosomal protein L22 | polymer | 117 | 12857.9 | 1 | UniProt (A0A077UKF9) Pfam (PF00237) | Staphylococcus aureus | |
| 40 | NA (AR) | 50S ribosomal protein L23 | polymer | 91 | 10625.4 | 1 | UniProt (W8TUB4) Pfam (PF00276) | Staphylococcus aureus | |
| 41 | OA (AS) | 50S ribosomal protein L24 | polymer | 105 | 11561.5 | 1 | UniProt (W8TRD5) Pfam (PF00467) Pfam (PF17136) | Staphylococcus aureus | |
| 42 | PA (AT) | 50S ribosomal protein L25 | polymer | 217 | 23810.6 | 1 | UniProt (A0A133Q8Z9) | Staphylococcus aureus | General stress protein CTC |
| 43 | QA (AU) | 50S ribosomal protein L27 | polymer | 94 | 10334.8 | 1 | UniProt (A0A0U1N012) | Staphylococcus aureus | |
| 44 | RA (AV) | 50S ribosomal protein L28 | polymer | 62 | 6995.3 | 1 | UniProt (A0A077URJ8) Pfam (PF00830) | Staphylococcus aureus | |
| 45 | SA (AW) | 50S ribosomal protein L29 | polymer | 73 | 8592.9 | 1 | UniProt (A0A0H3KED7) Pfam (PF00831) | Staphylococcus aureus | |
| 46 | TA (AX) | 50S ribosomal protein L30 | polymer | 59 | 6565.7 | 1 | UniProt (W8UVN7) Pfam (PF00327) | Staphylococcus aureus | |
| 47 | UA (AY) | 50S ribosomal protein L31 type B | polymer | 84 | 9737.9 | 1 | UniProt (W8TRP5) Pfam (PF01197) | Staphylococcus aureus | |
| 48 | VA (AZ) | 50S ribosomal protein L32 | polymer | 57 | 6500.6 | 1 | UniProt (A0A077UWR7) Pfam (PF01783) | Staphylococcus aureus | |
| 49 | WA (A1) | 50S ribosomal protein L33 | polymer | 49 | 5944.9 | 1 | UniProt (A0A077V2P0) Pfam (PF00471) | Staphylococcus aureus | |
| 50 | XA (A2) | 50S ribosomal protein L34 | polymer | 45 | 5454.6 | 1 | UniProt (Q2YZB6) Pfam (PF00468) | Staphylococcus aureus | |
| 51 | YA (A3) | 50S ribosomal protein L35 | polymer | 66 | 7722.4 | 1 | UniProt (A0A077UL47) Pfam (PF01632) | Staphylococcus aureus | |
| 52 | ZA (A4) | 50S ribosomal protein L36 | polymer | 37 | 4318.4 | 1 | UniProt (A0A077UGV8) Pfam (PF00444) | Staphylococcus aureus | |
| 53 | AB, AC, AD, AE, AF... (AA, AB, AC, AU, AZ) | MAGNESIUM ION | non-polymer | 24.3 | 205 | Chemie (MG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 52 |
| Total formula weight | 2165523.8 | |
| Non-Polymers* | Number of molecules | 205 |
| Total formula weight | 4982.5 | |
| All* | Total formula weight | 2170506.3 |
